RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 TRBV7-3A0A075B6L6 115 aa12.02□□□□□ -0.49
PDE4C-208ENST00000595343 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.49
PDE4C-208ENST00000595343 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.49
PDE4C-208ENST00000595343 M0R381 172 aa12.02□□□□□ -0.49
PDE4C-208ENST00000595343 SH2D1AO60880 128 aa12.02□□□□□ -0.49
PDE4C-208ENST00000595343 RPS10P46783 165 aaKnown RBP12.02□□□□□ -0.49
PDE4C-208ENST00000595343 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
PDE4C-208ENST00000595343 V9GYV3 84 aa12.02□□□□□ -0.49
PDE4C-208ENST00000595343 TRBV6-8A0A0A6YYG3 113 aa12.01□□□□□ -0.49
PDE4C-208ENST00000595343 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
PDE4C-208ENST00000595343 CRPP02741 224 aa12.01□□□□□ -0.49
PDE4C-208ENST00000595343 MPV17L2Q567V2 206 aa12□□□□□ -0.49
PDE4C-208ENST00000595343 CT83Q5H943 113 aa12□□□□□ -0.49
PDE4C-208ENST00000595343 FAM162BQ5T6X4 162 aa12□□□□□ -0.49
PDE4C-208ENST00000595343 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
PDE4C-208ENST00000595343 ZFP82Q8N141 532 aa12□□□□□ -0.49
PDE4C-208ENST00000595343 TMSB15BA0A087X1C1 80 aa11.99□□□□□ -0.49
PDE4C-208ENST00000595343 HLA-DQA1P01909 254 aa11.99□□□□□ -0.49
PDE4C-208ENST00000595343 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
PDE4C-208ENST00000595343 PRSS1P07477 247 aa11.99□□□□□ -0.49
PDE4C-208ENST00000595343 COX19Q49B96 90 aa11.99□□□□□ -0.49
PDE4C-208ENST00000595343 GATCO43716 136 aaKnown RBP11.98□□□□□ -0.49
PDE4C-208ENST00000595343 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
PDE4C-208ENST00000595343 DGAT2L7PQ6IED9 249 aa11.98□□□□□ -0.49
PDE4C-208ENST00000595343 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
PDE4C-208ENST00000595343 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
PDE4C-208ENST00000595343 SMIM27A0A1W2PRY6 76 aa11.97□□□□□ -0.49
PDE4C-208ENST00000595343 MT1HL1P0DM35 61 aa11.97□□□□□ -0.49
PDE4C-208ENST00000595343 C19orf71A6NCJ1 209 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 PANO1I0J062 215 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 MIAQ16674 131 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 NEXN-AS1Q8NBZ9 246 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 NUDT10Q8NFP7 164 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 NUDT11Q96G61 164 aa11.96□□□□□ -0.49
PDE4C-208ENST00000595343 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.49
PDE4C-208ENST00000595343 RAB4BP61018 213 aa11.95□□□□□ -0.5
PDE4C-208ENST00000595343 CHCHD5Q9BSY4 110 aa11.95□□□□□ -0.5
PDE4C-208ENST00000595343 S100A6P06703 90 aa11.94□□□□□ -0.5
PDE4C-208ENST00000595343 PRR27Q6MZM9 219 aa11.94□□□□□ -0.5
PDE4C-208ENST00000595343 RASL11AQ6T310 242 aa11.94□□□□□ -0.5
PDE4C-208ENST00000595343 SDIM1Q6ZPB5 146 aa11.94□□□□□ -0.5
PDE4C-208ENST00000595343 GFRA4Q9GZZ7 299 aa11.94□□□□□ -0.5
PDE4C-208ENST00000595343 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
PDE4C-208ENST00000595343 A8MWL6 223 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 PHOX2AO14813 284 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 P01737 135 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 TRGC2P03986 189 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 PKIAP61925 76 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 ZNF56Q15929 161 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 TSKUQ8WUA8 353 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 PRR34Q9NV39 138 aa11.93□□□□□ -0.5
PDE4C-208ENST00000595343 MT-ND6P03923 174 aa11.92□□□□□ -0.5
PDE4C-208ENST00000595343 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
PDE4C-208ENST00000595343 KRTAP26-1Q6PEX3 210 aa11.92□□□□□ -0.5
PDE4C-208ENST00000595343 Q6ZRU5 148 aa11.92□□□□□ -0.5
PDE4C-208ENST00000595343 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
PDE4C-208ENST00000595343 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
PDE4C-208ENST00000595343 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
PDE4C-208ENST00000595343 NTM-AS1Q6ZSK4 140 aa11.91□□□□□ -0.5
PDE4C-208ENST00000595343 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
PDE4C-208ENST00000595343 OR10AG1Q8NH19 301 aa11.91□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BKO60814 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BJP06899 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BOP23527 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BBP33778 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BDP58876 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BCP62807 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 RBX1P62877 108 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST2H2BEQ16778 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BHQ93079 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BNQ99877 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 HIST1H2BMQ99879 126 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 GNB1LQ9BYB4 327 aa11.9□□□□□ -0.5
PDE4C-208ENST00000595343 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
PDE4C-208ENST00000595343 TMEM97Q5BJF2 176 aa11.89□□□□□ -0.51
PDE4C-208ENST00000595343 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
PDE4C-208ENST00000595343 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
PDE4C-208ENST00000595343 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
PDE4C-208ENST00000595343 GAGE6Q13070 117 aa11.88□□□□□ -0.51
PDE4C-208ENST00000595343 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
PDE4C-208ENST00000595343 F5H697 171 aa11.87□□□□□ -0.51
PDE4C-208ENST00000595343 RPS20P60866 119 aaKnown RBP11.87□□□□□ -0.51
PDE4C-208ENST00000595343 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
PDE4C-208ENST00000595343 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
PDE4C-208ENST00000595343 XKRY2A2RUG3 117 aa11.86□□□□□ -0.51
PDE4C-208ENST00000595343 SNRPEP62304 92 aaKnown RBP11.86□□□□□ -0.51
PDE4C-208ENST00000595343 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
PDE4C-208ENST00000595343 COA6Q5JTJ3 125 aaKnown RBP11.86□□□□□ -0.51
PDE4C-208ENST00000595343 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
PDE4C-208ENST00000595343 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
PDE4C-208ENST00000595343 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
PDE4C-208ENST00000595343 SNAI2O43623 268 aa11.85□□□□□ -0.51
PDE4C-208ENST00000595343 FABP9Q0Z7S8 132 aa11.85□□□□□ -0.51
PDE4C-208ENST00000595343 SPANXN1Q5VSR9 72 aa11.85□□□□□ -0.51
PDE4C-208ENST00000595343 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
PDE4C-208ENST00000595343 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
PDE4C-208ENST00000595343 LRP2P98164 4655 aa11.84□□□□□ -0.51
PDE4C-208ENST00000595343 IGLV10-54A0A075B6I4 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms