RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 PGLYRP4Q96LB8 373 aa14.89□□□□□ -0.03
CFD-202ENST00000592860 TRAV26-2A0A0B4J265 109 aa14.88□□□□□ -0.03
CFD-202ENST00000592860 Q6ZNX1 250 aa14.88□□□□□ -0.03
CFD-202ENST00000592860 A0A1B0GUV1 79 aa14.87□□□□□ -0.03
CFD-202ENST00000592860 KRTAP29-1A8MX34 341 aaPredicted RBP14.87□□□□□ -0.03
CFD-202ENST00000592860 DGAT2L7PQ6IED9 249 aa14.87□□□□□ -0.03
CFD-202ENST00000592860 C9orf163Q8N9P6 203 aa14.87□□□□□ -0.03
CFD-202ENST00000592860 GATD1Q8NB37 220 aa14.87□□□□□ -0.03
CFD-202ENST00000592860 GTSF1Q8WW33 167 aa14.87□□□□□ -0.03
CFD-202ENST00000592860 PANO1I0J062 215 aa14.85□□□□□ -0.03
CFD-202ENST00000592860 AMTP48728 403 aa14.85□□□□□ -0.03
CFD-202ENST00000592860 FOXA3P55318 350 aaPredicted RBP14.85□□□□□ -0.03
CFD-202ENST00000592860 ALKAL2Q6UX46 152 aa14.85□□□□□ -0.03
CFD-202ENST00000592860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.85□□□□□ -0.03
CFD-202ENST00000592860 HMCN2Q8NDA2 5059 aa14.84□□□□□ -0.03
CFD-202ENST00000592860 COTL1Q14019 142 aa14.84□□□□□ -0.03
CFD-202ENST00000592860 TRAV8-4A0A0B4J246 113 aa14.83□□□□□ -0.04
CFD-202ENST00000592860 AKAP14Q86UN6 197 aa14.83□□□□□ -0.04
CFD-202ENST00000592860 RPL39LQ96EH5 51 aaKnown RBP14.83□□□□□ -0.04
CFD-202ENST00000592860 hCG_2014768A0A024R1R8 64 aa14.82□□□□□ -0.04
CFD-202ENST00000592860 UBE2L6O14933 153 aa14.82□□□□□ -0.04
CFD-202ENST00000592860 CLRN3Q8NCR9 226 aa14.82□□□□□ -0.04
CFD-202ENST00000592860 hDV102S1A0JD36 115 aa14.81□□□□□ -0.04
CFD-202ENST00000592860 SDIM1Q6ZPB5 146 aa14.81□□□□□ -0.04
CFD-202ENST00000592860 TMEM250H0YL14 139 aa14.8□□□□□ -0.04
CFD-202ENST00000592860 CNBPP62633 177 aaKnown RBP14.8□□□□□ -0.04
CFD-202ENST00000592860 LYPD6BQ8NI32 183 aa14.8□□□□□ -0.04
CFD-202ENST00000592860 GATCO43716 136 aaKnown RBP14.79□□□□□ -0.04
CFD-202ENST00000592860 SLPIP03973 132 aa14.79□□□□□ -0.04
CFD-202ENST00000592860 BLOC1S1P78537 153 aa14.79□□□□□ -0.04
CFD-202ENST00000592860 CEBPGP53567 150 aa14.78□□□□□ -0.04
CFD-202ENST00000592860 RPL37AP61513 92 aaKnown RBP14.78□□□□□ -0.04
CFD-202ENST00000592860 FAM231DQ6ZW35 169 aa14.78□□□□□ -0.04
CFD-202ENST00000592860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.76□□□□□ -0.05
CFD-202ENST00000592860 IGKV3OR2-268A0A0C4DH90 116 aa14.76□□□□□ -0.05
CFD-202ENST00000592860 IGKV2-29A2NJV5 120 aaPredicted RBP14.76□□□□□ -0.05
CFD-202ENST00000592860 HNRNPA3P51991 378 aaKnown RBP14.76□□□□□ -0.05
CFD-202ENST00000592860 SMIM15Q7Z3B0 74 aa14.76□□□□□ -0.05
CFD-202ENST00000592860 GAGE12HA6NDE8 117 aa14.75□□□□□ -0.05
CFD-202ENST00000592860 SDHAF1A6NFY7 115 aa14.74□□□□□ -0.05
CFD-202ENST00000592860 A8MWL6 223 aa14.74□□□□□ -0.05
CFD-202ENST00000592860 GAS8-AS1O95177 125 aa14.74□□□□□ -0.05
CFD-202ENST00000592860 C15orf56Q8N910 161 aa14.74□□□□□ -0.05
CFD-202ENST00000592860 NCR2O95944 276 aa14.73□□□□□ -0.05
CFD-202ENST00000592860 CIRBPQ14011 172 aaKnown RBP14.73□□□□□ -0.05
CFD-202ENST00000592860 AP5S1Q9NUS5 200 aa14.73□□□□□ -0.05
CFD-202ENST00000592860 APCSP02743 223 aa14.72□□□□□ -0.05
CFD-202ENST00000592860 CHTF8P0CG12 524 aa14.72□□□□□ -0.05
CFD-202ENST00000592860 CT83Q5H943 113 aa14.72□□□□□ -0.05
CFD-202ENST00000592860 AMMECR1LQ6DCA0 310 aa14.72□□□□□ -0.05
CFD-202ENST00000592860 IGHV3-64A0A075B6Q5 118 aa14.71□□□□□ -0.05
CFD-202ENST00000592860 FGF6P10767 208 aa14.71□□□□□ -0.05
CFD-202ENST00000592860 RNASEKQ6P5S7 137 aaKnown RBP14.71□□□□□ -0.05
CFD-202ENST00000592860 TEX261Q6UWH6 196 aa14.71□□□□□ -0.05
CFD-202ENST00000592860 LINC01551Q86U37 167 aa14.71□□□□□ -0.05
CFD-202ENST00000592860 SMIM7Q9BQ49 75 aa14.71□□□□□ -0.05
CFD-202ENST00000592860 OXTP01178 125 aa14.7□□□□□ -0.06
CFD-202ENST00000592860 CHCHD10Q8WYQ3 142 aaPredicted RBP14.7□□□□□ -0.06
CFD-202ENST00000592860 EIF5A2Q9GZV4 153 aaKnown RBP14.7□□□□□ -0.06
CFD-202ENST00000592860 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.69□□□□□ -0.06
CFD-202ENST00000592860 TRBV6-5A0A0K0K1A5 114 aa14.69□□□□□ -0.06
CFD-202ENST00000592860 FAM231BA6NCW3 169 aa14.69□□□□□ -0.06
CFD-202ENST00000592860 HIGD2BQ4VC39 106 aa14.69□□□□□ -0.06
CFD-202ENST00000592860 HIGD1CA8MV81 97 aa14.68□□□□□ -0.06
CFD-202ENST00000592860 H7C423 109 aa14.68□□□□□ -0.06
CFD-202ENST00000592860 I3L3M4 83 aa14.68□□□□□ -0.06
CFD-202ENST00000592860 TSKUQ8WUA8 353 aa14.68□□□□□ -0.06
CFD-202ENST00000592860 TSHBP01222 138 aa14.67□□□□□ -0.06
CFD-202ENST00000592860 PMCHP20382 165 aa14.67□□□□□ -0.06
CFD-202ENST00000592860 SPACA4Q8TDM5 124 aa14.67□□□□□ -0.06
CFD-202ENST00000592860 BORCS7Q96B45 105 aa14.67□□□□□ -0.06
CFD-202ENST00000592860 RNF185Q96GF1 192 aa14.67□□□□□ -0.06
CFD-202ENST00000592860 FAM210AQ96ND0 272 aa14.67□□□□□ -0.06
CFD-202ENST00000592860 A0A1B0GUT8 65 aa14.66□□□□□ -0.06
CFD-202ENST00000592860 SRP19P09132 144 aaKnown RBP14.66□□□□□ -0.06
CFD-202ENST00000592860 CFAP161Q6P656 301 aa14.66□□□□□ -0.06
CFD-202ENST00000592860 TMEM242Q9NWH2 141 aa14.66□□□□□ -0.06
CFD-202ENST00000592860 A0A087WYN8 130 aa14.65□□□□□ -0.06
CFD-202ENST00000592860 ZNF727A8MUV8 499 aa14.65□□□□□ -0.06
CFD-202ENST00000592860 ESDP10768 282 aa14.65□□□□□ -0.06
CFD-202ENST00000592860 RPS10P46783 165 aaKnown RBP14.65□□□□□ -0.06
CFD-202ENST00000592860 TMEM191AQ9H0A3 160 aa14.65□□□□□ -0.06
CFD-202ENST00000592860 NDUFS6O75380 124 aaKnown RBP14.64□□□□□ -0.07
CFD-202ENST00000592860 FOXI1Q12951 378 aa14.64□□□□□ -0.07
CFD-202ENST00000592860 ST20Q9HBF5 79 aa14.64□□□□□ -0.07
CFD-202ENST00000592860 OSTCQ9NRP0 149 aa14.64□□□□□ -0.07
CFD-202ENST00000592860 ZNF25P17030 456 aaPredicted RBP14.63□□□□□ -0.07
CFD-202ENST00000592860 RAB4AP20338 218 aa14.63□□□□□ -0.07
CFD-202ENST00000592860 AMN1Q8IY45 258 aa14.63□□□□□ -0.07
CFD-202ENST00000592860 OR5A1Q8NGJ0 315 aa14.63□□□□□ -0.07
CFD-202ENST00000592860 DPH3Q96FX2 82 aa14.63□□□□□ -0.07
CFD-202ENST00000592860 GVQW2A0A096LPI5 108 aaPredicted RBP14.62□□□□□ -0.07
CFD-202ENST00000592860 COX6A2Q02221 97 aa14.62□□□□□ -0.07
CFD-202ENST00000592860 V9GYV3 84 aa14.62□□□□□ -0.07
CFD-202ENST00000592860 XCL1P47992 114 aa14.61□□□□□ -0.07
CFD-202ENST00000592860 POLR2KP53803 58 aaKnown RBP14.61□□□□□ -0.07
CFD-202ENST00000592860 PRSS3P2Q8NHM4 247 aa14.61□□□□□ -0.07
CFD-202ENST00000592860 BTF3L4Q96K17 158 aa14.61□□□□□ -0.07
CFD-202ENST00000592860 LINC00959A0A1B0GUT2 108 aa14.6□□□□□ -0.07
CFD-202ENST00000592860 SMKR1H3BMG3 65 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms