RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 IGHV3-30-3P0DP02 117 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 CD28P10747 220 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 COL8A2P25067 703 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 RPL27AP46776 148 aaKnown RBP3.94□□□□□ -1.78
VMP1-215ENST00000592619 FXYD6P3P58550 94 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 TSPEAR-AS2P59090 65 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 RNASE13Q5GAN3 156 aaKnown RBP3.94□□□□□ -1.78
VMP1-215ENST00000592619 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 OR5AS1Q8N127 324 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 ZFAND2AQ8N6M9 145 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 ZNF414Q96IQ9 312 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 CHCHD7Q9BUK0 85 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 GABARAPL1Q9H0R8 117 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 ZNF222Q9UK12 451 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 UNC79Q9P2D8 2635 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 HECTD1Q9ULT8 2610 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 VPS13CQ709C8 3753 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 PCNX1Q96RV3 2341 aa3.94□□□□□ -1.78
VMP1-215ENST00000592619 ANKHD1Q8IWZ3 2542 aaKnown RBP3.93□□□□□ -1.78
VMP1-215ENST00000592619 DSCAML1Q8TD84 2053 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 TACC2O95359 2948 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 APCP25054 2843 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 CENPEQ02224 2701 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 TRBV7-7A0A0K0K1E9 115 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 GRIFINA4D1Z8 144 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 ZNF736B4DX44 427 aaPredicted RBP3.93□□□□□ -1.78
VMP1-215ENST00000592619 C3orf84H3BNL1 204 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 HINT1P49773 126 aaPredicted RBP3.93□□□□□ -1.78
VMP1-215ENST00000592619 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
VMP1-215ENST00000592619 BLCAPP62952 87 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 MRPL51Q4U2R6 128 aaKnown RBP3.93□□□□□ -1.78
VMP1-215ENST00000592619 MIC13Q5XKP0 118 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 CYB561D1Q8N8Q1 229 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 TSKUQ8WUA8 353 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 Q96M85 177 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 DSCR8Q96T75 97 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 C20orf78Q9BR46 151 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 TMEM242Q9NWH2 141 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 TMEM14AQ9Y6G1 99 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 SPTBN1Q01082 2364 aaKnown RBP3.93□□□□□ -1.78
VMP1-215ENST00000592619 LRBAP50851 2863 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 FREM1Q5H8C1 2179 aa3.93□□□□□ -1.78
VMP1-215ENST00000592619 SETXQ7Z333 2677 aaKnown RBP3.92□□□□□ -1.78
VMP1-215ENST00000592619 IGHV3-21A0A0B4J1V1 117 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 IGHV1-18A0A0C4DH31 117 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 BPY2O14599 106 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 FXYD7P58549 80 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 PCBD1P61457 104 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 LGALSLQ3ZCW2 172 aaPredicted RBP3.92□□□□□ -1.78
VMP1-215ENST00000592619 FAM27BQ5VT28 67 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 C12orf73Q69YU5 71 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 ZFP2Q6ZN57 461 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 FAM216BQ8N7L0 139 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 OR2T35Q8NGX2 323 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 MYOZ3Q8TDC0 251 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 C10orf105Q8TEF2 133 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 PLA2G12AQ9BZM1 189 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 C11orf1Q9H5F2 150 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 CMC2Q9NRP2 79 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 TAS2R4Q9NYW5 299 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 HHLA3Q9XRX5 114 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 PHLDA3Q9Y5J5 127 aa3.92□□□□□ -1.78
VMP1-215ENST00000592619 PDZD2O15018 2839 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 IGHV3-7P01780 117 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 APCSP02743 223 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 ZNF688P0C7X2 276 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 SAA1P0DJI8 122 aaPredicted RBP3.91□□□□□ -1.78
VMP1-215ENST00000592619 PTHLHP12272 177 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 CBLN1P23435 193 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 BVES-AS1Q5T3Y7 98 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 Q6ZR03 302 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 SCGB3A1Q96QR1 104 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 ZNF355PQ9NSJ1 428 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 SPCS1Q9Y6A9 102 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
VMP1-215ENST00000592619 IGLV3-9A0A075B6K5 115 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 IGHV3-49A0A0A0MS15 119 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 UBE2L5PA0A1B0GUS4 154 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 ZNF705FA8MVS1 300 aaPredicted RBP3.9□□□□□ -1.79
VMP1-215ENST00000592619 E7EQL1 145 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 K7ERS5 55 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 SDCBPO00560 298 aaPredicted RBP3.9□□□□□ -1.79
VMP1-215ENST00000592619 ZNF705BP0CI00 300 aaPredicted RBP3.9□□□□□ -1.79
VMP1-215ENST00000592619 CGB3P0DN86 165 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 CGB7P0DN87 165 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 ADCYAP1P18509 176 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 FUSP35637 526 aaKnown RBP eCLIP3.9□□□□□ -1.79
VMP1-215ENST00000592619 CMC4P56277 68 aaPredicted RBP3.9□□□□□ -1.79
VMP1-215ENST00000592619 UBE2L3P68036 154 aaKnown RBP3.9□□□□□ -1.79
VMP1-215ENST00000592619 KISS1Q15726 138 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 SIGLECL1Q8N7X8 197 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 OR10AG1Q8NH19 301 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 PPDPFLQ8WWR9 84 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms