RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
ERCC1-213ENST00000592023 HIGD1CA8MV81 97 aa9.95□□□□□ -0.82
ERCC1-213ENST00000592023 UBE2L6O14933 153 aa9.95□□□□□ -0.82
ERCC1-213ENST00000592023 REG3AQ06141 175 aa9.95□□□□□ -0.82
ERCC1-213ENST00000592023 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
ERCC1-213ENST00000592023 TSKUQ8WUA8 353 aa9.95□□□□□ -0.82
ERCC1-213ENST00000592023 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
ERCC1-213ENST00000592023 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
ERCC1-213ENST00000592023 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
ERCC1-213ENST00000592023 USP17L23D6RBM5 183 aa9.94□□□□□ -0.82
ERCC1-213ENST00000592023 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
ERCC1-213ENST00000592023 GFRA4Q9GZZ7 299 aa9.94□□□□□ -0.82
ERCC1-213ENST00000592023 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
ERCC1-213ENST00000592023 TEX261Q6UWH6 196 aa9.93□□□□□ -0.82
ERCC1-213ENST00000592023 Q6ZSA8 131 aa9.93□□□□□ -0.82
ERCC1-213ENST00000592023 ISOC2Q96AB3 205 aa9.93□□□□□ -0.82
ERCC1-213ENST00000592023 V9GYV3 84 aa9.93□□□□□ -0.82
ERCC1-213ENST00000592023 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
ERCC1-213ENST00000592023 C9JQL5 133 aa9.92□□□□□ -0.82
ERCC1-213ENST00000592023 RPL23P62829 140 aaKnown RBP9.92□□□□□ -0.82
ERCC1-213ENST00000592023 SRSF3P84103 164 aaKnown RBP9.92□□□□□ -0.82
ERCC1-213ENST00000592023 ADIRFQ15847 76 aa9.92□□□□□ -0.82
ERCC1-213ENST00000592023 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
ERCC1-213ENST00000592023 A0A1B0GUV1 79 aa9.91□□□□□ -0.82
ERCC1-213ENST00000592023 APCSP02743 223 aa9.91□□□□□ -0.82
ERCC1-213ENST00000592023 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
ERCC1-213ENST00000592023 FAM74A3Q4VXF1 159 aa9.91□□□□□ -0.82
ERCC1-213ENST00000592023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.9□□□□□ -0.82
ERCC1-213ENST00000592023 IGKV2-29A2NJV5 120 aaPredicted RBP9.9□□□□□ -0.82
ERCC1-213ENST00000592023 FAM231BA6NCW3 169 aa9.9□□□□□ -0.82
ERCC1-213ENST00000592023 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
ERCC1-213ENST00000592023 GAS8-AS1O95177 125 aa9.9□□□□□ -0.82
ERCC1-213ENST00000592023 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
ERCC1-213ENST00000592023 TMEM191AQ9H0A3 160 aa9.9□□□□□ -0.82
ERCC1-213ENST00000592023 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
ERCC1-213ENST00000592023 NCR2O95944 276 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 PRSS1P07477 247 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 PEA15Q15121 130 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 AMMECR1LQ6DCA0 310 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 AMN1Q8IY45 258 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 NUP35Q8NFH5 326 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 FAT1Q14517 4588 aa9.89□□□□□ -0.83
ERCC1-213ENST00000592023 TRAV8-4A0A0B4J246 113 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 IGKV3OR2-268A0A0C4DH90 116 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 TRBV6-5A0A0K0K1A5 114 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 PMCHP20382 165 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 RIGQ13278 110 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 RNASEKQ6P5S7 137 aaKnown RBP9.88□□□□□ -0.83
ERCC1-213ENST00000592023 SCXQ7RTU7 201 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 TMEM242Q9NWH2 141 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 DNAH8Q96JB1 4490 aa9.88□□□□□ -0.83
ERCC1-213ENST00000592023 I3L3M4 83 aa9.87□□□□□ -0.83
ERCC1-213ENST00000592023 RAB4AP20338 218 aa9.87□□□□□ -0.83
ERCC1-213ENST00000592023 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
ERCC1-213ENST00000592023 MRAP2Q96G30 205 aa9.87□□□□□ -0.83
ERCC1-213ENST00000592023 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
ERCC1-213ENST00000592023 NAT8BQ9UHF3 227 aa9.87□□□□□ -0.83
ERCC1-213ENST00000592023 SMKR1H3BMG3 65 aa9.86□□□□□ -0.83
ERCC1-213ENST00000592023 FGF6P10767 208 aa9.86□□□□□ -0.83
ERCC1-213ENST00000592023 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
ERCC1-213ENST00000592023 TSHBP01222 138 aa9.85□□□□□ -0.83
ERCC1-213ENST00000592023 SMDT1Q9H4I9 107 aa9.85□□□□□ -0.83
ERCC1-213ENST00000592023 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
ERCC1-213ENST00000592023 hDV102S1A0JD36 115 aa9.84□□□□□ -0.83
ERCC1-213ENST00000592023 H7C423 109 aa9.84□□□□□ -0.83
ERCC1-213ENST00000592023 CHAC1Q9BUX1 264 aa9.84□□□□□ -0.83
ERCC1-213ENST00000592023 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
ERCC1-213ENST00000592023 CAMPP49913 170 aa9.83□□□□□ -0.84
ERCC1-213ENST00000592023 CLRN3Q8NCR9 226 aa9.83□□□□□ -0.84
ERCC1-213ENST00000592023 ESDP10768 282 aa9.82□□□□□ -0.84
ERCC1-213ENST00000592023 ZNF25P17030 456 aaPredicted RBP9.82□□□□□ -0.84
ERCC1-213ENST00000592023 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
ERCC1-213ENST00000592023 DGAT2L7PQ6IED9 249 aa9.82□□□□□ -0.84
ERCC1-213ENST00000592023 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
ERCC1-213ENST00000592023 BTF3L4Q96K17 158 aa9.82□□□□□ -0.84
ERCC1-213ENST00000592023 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
ERCC1-213ENST00000592023 PLA2G1BP04054 148 aaKnown RBP9.81□□□□□ -0.84
ERCC1-213ENST00000592023 NRACQ8N912 160 aa9.81□□□□□ -0.84
ERCC1-213ENST00000592023 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
ERCC1-213ENST00000592023 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
ERCC1-213ENST00000592023 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
ERCC1-213ENST00000592023 C7orf77A4D0Y5 90 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 FCER1GP30273 86 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
ERCC1-213ENST00000592023 MRPL51Q4U2R6 128 aaKnown RBP9.8□□□□□ -0.84
ERCC1-213ENST00000592023 FAM104BQ5XKR9 115 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 MRPL54Q6P161 138 aaKnown RBP9.8□□□□□ -0.84
ERCC1-213ENST00000592023 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 OR5A1Q8NGJ0 315 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 AP5S1Q9NUS5 200 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
ERCC1-213ENST00000592023 PPP1R17O96001 155 aa9.79□□□□□ -0.84
ERCC1-213ENST00000592023 CNBPP62633 177 aaKnown RBP9.79□□□□□ -0.84
ERCC1-213ENST00000592023 A0A1B0GW15 77 aa9.78□□□□□ -0.84
ERCC1-213ENST00000592023 VCYO14598 125 aa9.78□□□□□ -0.84
ERCC1-213ENST00000592023 RAB14P61106 215 aa9.78□□□□□ -0.84
ERCC1-213ENST00000592023 HBBP68871 147 aa9.78□□□□□ -0.84
ERCC1-213ENST00000592023 HIGD2BQ4VC39 106 aa9.78□□□□□ -0.84
ERCC1-213ENST00000592023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms