RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 AMN1Q8IY45 258 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 FRZBQ92765 325 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 TMEM191AQ9H0A3 160 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
CLIP3-205ENST00000592017 UBE2L6O14933 153 aa9.25□□□□□ -0.93
CLIP3-205ENST00000592017 IFITM2Q01629 132 aa9.25□□□□□ -0.93
CLIP3-205ENST00000592017 CDPF1Q6NVV7 123 aa9.25□□□□□ -0.93
CLIP3-205ENST00000592017 SMIM27A0A1W2PRY6 76 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 GAS8-AS1O95177 125 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 CAMPP49913 170 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 Q0VG73 95 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 WFDC2Q14508 124 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 Q8N814 137 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 RNF185Q96GF1 192 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
CLIP3-205ENST00000592017 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 SDHAF1A6NFY7 115 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 SMKR1H3BMG3 65 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 NCR2O95944 276 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 RAB4AP20338 218 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 XGP55808 180 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 MRPL54Q6P161 138 aaKnown RBP9.23□□□□□ -0.93
CLIP3-205ENST00000592017 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 BAALCQ8WXS3 180 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
CLIP3-205ENST00000592017 APCSP02743 223 aa9.22□□□□□ -0.93
CLIP3-205ENST00000592017 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
CLIP3-205ENST00000592017 LINC00269Q8N2A0 174 aa9.22□□□□□ -0.93
CLIP3-205ENST00000592017 HLA-DQA1P01909 254 aa9.21□□□□□ -0.94
CLIP3-205ENST00000592017 PMCHP20382 165 aa9.21□□□□□ -0.94
CLIP3-205ENST00000592017 PNRC1Q12796 327 aaPredicted RBP9.21□□□□□ -0.94
CLIP3-205ENST00000592017 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
CLIP3-205ENST00000592017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.2□□□□□ -0.94
CLIP3-205ENST00000592017 TRBV6-5A0A0K0K1A5 114 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 IGKV2-29A2NJV5 120 aaPredicted RBP9.2□□□□□ -0.94
CLIP3-205ENST00000592017 I3L3M4 83 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 PPP1R2P9O14990 202 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 GCSHP23434 173 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 MIAQ16674 131 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 C20orf203Q8NBC4 194 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
CLIP3-205ENST00000592017 TMEM242Q9NWH2 141 aa9.2□□□□□ -0.94
CLIP3-205ENST00000592017 A0A1B0GW15 77 aa9.19□□□□□ -0.94
CLIP3-205ENST00000592017 HBBP68871 147 aa9.19□□□□□ -0.94
CLIP3-205ENST00000592017 REG3AQ06141 175 aa9.19□□□□□ -0.94
CLIP3-205ENST00000592017 MRPL51Q4U2R6 128 aaKnown RBP9.19□□□□□ -0.94
CLIP3-205ENST00000592017 AMMECR1LQ6DCA0 310 aa9.19□□□□□ -0.94
CLIP3-205ENST00000592017 TMEM70Q9BUB7 260 aa9.19□□□□□ -0.94
CLIP3-205ENST00000592017 PRR34Q9NV39 138 aa9.19□□□□□ -0.94
CLIP3-205ENST00000592017 IGLV10-54A0A075B6I4 117 aa9.18□□□□□ -0.94
CLIP3-205ENST00000592017 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
CLIP3-205ENST00000592017 S100A8P05109 93 aa9.18□□□□□ -0.94
CLIP3-205ENST00000592017 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
CLIP3-205ENST00000592017 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
CLIP3-205ENST00000592017 UQCC3Q6UW78 93 aa9.18□□□□□ -0.94
CLIP3-205ENST00000592017 VPS13BQ7Z7G8 4022 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 A0A1B0GUV1 79 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 F8W036 122 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 TSHBP01222 138 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 COMMD7Q86VX2 200 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 ANAPC16Q96DE5 110 aa9.17□□□□□ -0.94
CLIP3-205ENST00000592017 PPP1R17O96001 155 aa9.16□□□□□ -0.94
CLIP3-205ENST00000592017 ADCYAP1P18509 176 aa9.16□□□□□ -0.94
CLIP3-205ENST00000592017 CKS2P33552 79 aa9.16□□□□□ -0.94
CLIP3-205ENST00000592017 NRACQ8N912 160 aa9.16□□□□□ -0.94
CLIP3-205ENST00000592017 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 TMEM218A2RU14 115 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 FGF6P10767 208 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 FCER1GP30273 86 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 POLR2KP53803 58 aaKnown RBP9.15□□□□□ -0.94
CLIP3-205ENST00000592017 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
CLIP3-205ENST00000592017 HAMPP81172 84 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 ATP5L2Q7Z4Y8 100 aa9.15□□□□□ -0.94
CLIP3-205ENST00000592017 D6R8Y8 96 aa9.14□□□□□ -0.95
CLIP3-205ENST00000592017 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
CLIP3-205ENST00000592017 VCYO14598 125 aa9.14□□□□□ -0.95
CLIP3-205ENST00000592017 BTF3L4Q96K17 158 aa9.14□□□□□ -0.95
CLIP3-205ENST00000592017 HERC1Q15751 4861 aa9.14□□□□□ -0.95
CLIP3-205ENST00000592017 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 LINC00862A6NCI5 91 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 H7C423 109 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 ESDP10768 282 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 C14orf177Q52M58 125 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 FAM30AQ9NZY2 134 aa9.13□□□□□ -0.95
CLIP3-205ENST00000592017 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
CLIP3-205ENST00000592017 SMR3BP02814 79 aaPredicted RBP9.12□□□□□ -0.95
CLIP3-205ENST00000592017 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
CLIP3-205ENST00000592017 LINC01620Q4KN68 170 aa9.12□□□□□ -0.95
CLIP3-205ENST00000592017 KRTAP26-1Q6PEX3 210 aa9.12□□□□□ -0.95
CLIP3-205ENST00000592017 SRRM2Q9UQ35 2752 aaKnown RBP9.12□□□□□ -0.95
CLIP3-205ENST00000592017 NPYP01303 97 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms