RNA–Protein interactions for RNA: ENST00000590588.5

ZNF540-209, Transcript of zinc finger protein 540, humanhuman

TSL 3

Gene ZNF540, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-209ENST00000590588 SPINK4O60575 86 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 HSBP1O75506 76 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 PRB4P10163 310 aaPredicted RBP7.27□□□□□ -1.25
ZNF540-209ENST00000590588 CRIP1P50238 77 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 ZNF415Q09FC8 603 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 FHL2Q14192 279 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 TEX43Q6ZNM6 134 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 CIRBP-AS1Q8TBR5 109 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 C8orf49Q96NF6 230 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 NAGKQ9UJ70 344 aa7.27□□□□□ -1.25
ZNF540-209ENST00000590588 IGHV3-38A0A0C4DH36 116 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 J3KRW8 73 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 AMTP48728 403 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 CACNG7P62955 275 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 C11orf72Q8NBR9 251 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 PGLYRP4Q96LB8 373 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 TMEM191AQ9H0A3 160 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 Q9HAA7 133 aa7.26□□□□□ -1.25
ZNF540-209ENST00000590588 IGKV2-40A0A087WW87 121 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-209ENST00000590588 IGKV2D-40P01614 121 aaPredicted RBP7.25□□□□□ -1.25
ZNF540-209ENST00000590588 GYPEP15421 78 aa7.25□□□□□ -1.25
ZNF540-209ENST00000590588 LEPP41159 167 aa7.25□□□□□ -1.25
ZNF540-209ENST00000590588 CAMPP49913 170 aa7.25□□□□□ -1.25
ZNF540-209ENST00000590588 RPL37AP61513 92 aaKnown RBP7.25□□□□□ -1.25
ZNF540-209ENST00000590588 ANXA2RQ3ZCQ2 193 aa7.25□□□□□ -1.25
ZNF540-209ENST00000590588 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
ZNF540-209ENST00000590588 TM2D2Q9BX73 214 aa7.25□□□□□ -1.25
ZNF540-209ENST00000590588 TRGV4A0A0C4DH28 118 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 PCP4L1A6NKN8 68 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 SNAI2O43623 268 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 ORM1P02763 201 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 SNRPCP09234 159 aaKnown RBP7.24□□□□□ -1.25
ZNF540-209ENST00000590588 ARMS2P0C7Q2 107 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 LINC01556Q5JQF7 62 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 FAM19A4Q96LR4 140 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 SGK494Q96LW2 274 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 VGLL1Q99990 258 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 SSBP4Q9BWG4 385 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-209ENST00000590588 AGPAT4-IT1Q9H0P7 198 aa7.24□□□□□ -1.25
ZNF540-209ENST00000590588 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-209ENST00000590588 TRAV21A0A0B4J279 112 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 DDTP30046 118 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 HNRNPA3P51991 378 aaKnown RBP7.23□□□□□ -1.25
ZNF540-209ENST00000590588 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 SMIM15Q7Z3B0 74 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 ORMDL3Q8N138 153 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 KRTAP9-2Q9BYQ4 174 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 HSPB8Q9UJY1 196 aa7.23□□□□□ -1.25
ZNF540-209ENST00000590588 LINC01546A6NGU7 62 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 PRSS47A8MTI9 375 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 K7EMI3 77 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 NUPR1O60356 82 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 SCGB1D1O95968 90 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 LINC00614P0C842 121 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 WFDC2Q14508 124 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 KIAA1644Q3SXP7 199 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 LYZL1Q6UWQ5 148 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 Q6ZRU5 148 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 NIT1Q86X76 327 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
ZNF540-209ENST00000590588 C7orf71A4D174 169 aa7.21□□□□□ -1.26
ZNF540-209ENST00000590588 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
ZNF540-209ENST00000590588 LINC00587B1AMM8 73 aa7.21□□□□□ -1.26
ZNF540-209ENST00000590588 PRAC2D3DTV9 90 aa7.21□□□□□ -1.26
ZNF540-209ENST00000590588 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
ZNF540-209ENST00000590588 SH2D6Q7Z4S9 175 aa7.21□□□□□ -1.26
ZNF540-209ENST00000590588 MRPL16Q9NX20 251 aaKnown RBP7.21□□□□□ -1.26
ZNF540-209ENST00000590588 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 LECT2O14960 151 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 PPP1R17O96001 155 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 ZNF80P51504 273 aaPredicted RBP7.2□□□□□ -1.26
ZNF540-209ENST00000590588 TIRAPP58753 221 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 ZNF664Q8N3J9 261 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 Q8TAT8 98 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
ZNF540-209ENST00000590588 NXT2Q9NPJ8 142 aaKnown RBP7.2□□□□□ -1.26
ZNF540-209ENST00000590588 KLLNB2CW77 178 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 LEPROTL1O95214 131 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 LAGE3Q14657 143 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
ZNF540-209ENST00000590588 FA2HQ7L5A8 372 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 ZFAND2AQ8N6M9 145 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 MRAP2Q96G30 205 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
ZNF540-209ENST00000590588 IGKV3D-20A0A0C4DH25 116 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 IGHV1-24A0A0C4DH33 117 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 M0R381 172 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 GAS8-AS1O95177 125 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 Q8N976 141 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 URB1-AS1Q96HZ7 61 aa7.18□□□□□ -1.26
ZNF540-209ENST00000590588 ZNF479Q96JC4 524 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms