RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 BEAN1Q3B7T3 259 aa7.76□□□□□ -1.17
ZNF540-208ENST00000589857 HIST2H2BDQ6DRA6 164 aa7.76□□□□□ -1.17
ZNF540-208ENST00000589857 SCGB1D4Q6XE38 83 aa7.76□□□□□ -1.17
ZNF540-208ENST00000589857 VCX2Q9H322 139 aa7.76□□□□□ -1.17
ZNF540-208ENST00000589857 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
ZNF540-208ENST00000589857 CBY1Q9Y3M2 126 aa7.76□□□□□ -1.17
ZNF540-208ENST00000589857 TRRAPQ9Y4A5 3859 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 H3BUT2 72 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 RS1O15537 224 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 CIDEAO60543 219 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 SAMD5Q5TGI4 173 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 Q6ZVH6 145 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 C1QTNF4Q9BXJ3 329 aa7.75□□□□□ -1.17
ZNF540-208ENST00000589857 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
ZNF540-208ENST00000589857 RBMY1BA6NDE4 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 RBMY1EA6NEQ0 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 RBMY1DP0C7P1 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 RBMY1A1P0DJD3 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 RBMY1CP0DJD4 496 aa7.74□□□□□ -1.17
ZNF540-208ENST00000589857 HTN1P15515 57 aa7.74□□□□□ -1.17
ZNF540-208ENST00000589857 LGALS3P17931 250 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 FXYD2P54710 66 aa7.74□□□□□ -1.17
ZNF540-208ENST00000589857 RBMY1FQ15415 496 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 TMEM170BQ5T4T1 132 aa7.74□□□□□ -1.17
ZNF540-208ENST00000589857 MORN3Q6PF18 240 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 NHP2Q9NX24 153 aaKnown RBP7.74□□□□□ -1.17
ZNF540-208ENST00000589857 SPCS1Q9Y6A9 102 aa7.74□□□□□ -1.17
ZNF540-208ENST00000589857 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 K7ERU9 68 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 LEPROTO15243 131 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 IGHV3-53P01767 116 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 CD28P10747 220 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 RPL39P62891 51 aaKnown RBP7.73□□□□□ -1.17
ZNF540-208ENST00000589857 COTL1Q14019 142 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 UFSP1Q6NVU6 142 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 MAPKAPK5-AS1Q8N8E1 139 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 RAB37Q96AX2 223 aa7.73□□□□□ -1.17
ZNF540-208ENST00000589857 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
ZNF540-208ENST00000589857 TRBV10-1A0A0K0K1A3 114 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 A0A1B0GWB2 263 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 A0A1W2PRX2 142 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 SRSF9Q13242 221 aaKnown RBP eCLIP7.72□□□□□ -1.17
ZNF540-208ENST00000589857 ODF3L2Q3SX64 289 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 C11orf72Q8NBR9 251 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 LINC01006Q8NI28 216 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 TTTY13Q9BZ97 58 aa7.72□□□□□ -1.17
ZNF540-208ENST00000589857 IGLV4-3A0A075B6K6 122 aa7.71□□□□□ -1.18
ZNF540-208ENST00000589857 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
ZNF540-208ENST00000589857 J3QQQ9 107 aa7.71□□□□□ -1.18
ZNF540-208ENST00000589857 SAP30O75446 220 aa7.71□□□□□ -1.18
ZNF540-208ENST00000589857 C12orf74Q32Q52 190 aa7.71□□□□□ -1.18
ZNF540-208ENST00000589857 TMEM263Q8WUH6 116 aaKnown RBP7.71□□□□□ -1.18
ZNF540-208ENST00000589857 CITED2Q99967 270 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-208ENST00000589857 TIMM21Q9BVV7 248 aa7.71□□□□□ -1.18
ZNF540-208ENST00000589857 TMEM223A0PJW6 202 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 P0DMU3 169 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 FAM231AP0DMU4 169 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 FAM231CP0DMU5 169 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 C16orf74Q96GX8 76 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 ZNF479Q96JC4 524 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 AMELXQ99217 191 aa7.7□□□□□ -1.18
ZNF540-208ENST00000589857 VWFP04275 2813 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 TRAV4A0A0B4J268 109 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 IGLL5B9A064 214 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 TMEM238C9JI98 176 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 AZU1P20160 251 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 MRPS36P82909 103 aaKnown RBP7.69□□□□□ -1.18
ZNF540-208ENST00000589857 RPL36AP83881 106 aaKnown RBP7.69□□□□□ -1.18
ZNF540-208ENST00000589857 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 NDUFA11Q86Y39 141 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 IL17DQ8TAD2 202 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 PHLDA1Q8WV24 401 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-208ENST00000589857 RPL36ALQ969Q0 106 aaKnown RBP7.69□□□□□ -1.18
ZNF540-208ENST00000589857 MRPL16Q9NX20 251 aaKnown RBP7.69□□□□□ -1.18
ZNF540-208ENST00000589857 XCL2Q9UBD3 114 aa7.69□□□□□ -1.18
ZNF540-208ENST00000589857 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
ZNF540-208ENST00000589857 TINCRA0A1B0GVN0 87 aa7.68□□□□□ -1.18
ZNF540-208ENST00000589857 IGLV1-51P01701 117 aa7.68□□□□□ -1.18
ZNF540-208ENST00000589857 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-208ENST00000589857 PROK1P58294 105 aa7.68□□□□□ -1.18
ZNF540-208ENST00000589857 DAZ2Q13117 558 aaKnown RBP7.68□□□□□ -1.18
ZNF540-208ENST00000589857 DAZ4Q86SG3 579 aaKnown RBP7.68□□□□□ -1.18
ZNF540-208ENST00000589857 ZNRF2Q8NHG8 242 aa7.68□□□□□ -1.18
ZNF540-208ENST00000589857 DAZ3Q9NR90 486 aaKnown RBP7.68□□□□□ -1.18
ZNF540-208ENST00000589857 NOTCH1P46531 2555 aa7.68□□□□□ -1.18
ZNF540-208ENST00000589857 TRGV1A0A0A0MS02 117 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 A0A0J9YY99 117 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 K7EQD1 137 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 RPL24P83731 157 aaKnown RBP7.67□□□□□ -1.18
ZNF540-208ENST00000589857 OCIAD2Q56VL3 154 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 SLC25A29Q8N8R3 303 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 MRAPQ8TCY5 172 aa7.67□□□□□ -1.18
ZNF540-208ENST00000589857 RNASE8Q8TDE3 154 aaKnown RBP7.67□□□□□ -1.18
ZNF540-208ENST00000589857 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-208ENST00000589857 F8W1H4 67 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms