RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 COLCA2A8K830 154 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 VCYO14598 125 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 IGHV3-30P01768 117 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 IGHV3-33P01772 117 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 IGHV3-30-3P0DP02 117 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 IGHV3-30-5P0DP03 117 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 TMEM97Q5BJF2 176 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 NIT1Q86X76 327 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
SMARCA4-213ENST00000587988 NBDYA0A0U1RRE5 68 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 PRSS47A8MTI9 375 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 AMTP48728 403 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 GAGE6Q13070 117 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 LINC01556Q5JQF7 62 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 Q6ZR54 194 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 CHCHD5Q9BSY4 110 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 ALKBH7Q9BT30 221 aaPredicted RBP7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
SMARCA4-213ENST00000587988 TMEM262E9PQX1 116 aa7.25□□□□□ -1.25
SMARCA4-213ENST00000587988 TCAPO15273 167 aa7.25□□□□□ -1.25
SMARCA4-213ENST00000587988 ESDP10768 282 aa7.25□□□□□ -1.25
SMARCA4-213ENST00000587988 MAP1LC3AQ9H492 121 aa7.25□□□□□ -1.25
SMARCA4-213ENST00000587988 HYDINQ4G0P3 5121 aa7.24□□□□□ -1.25
SMARCA4-213ENST00000587988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.24□□□□□ -1.25
SMARCA4-213ENST00000587988 IGKV2-29A2NJV5 120 aaPredicted RBP7.24□□□□□ -1.25
SMARCA4-213ENST00000587988 MPV17L2Q567V2 206 aa7.24□□□□□ -1.25
SMARCA4-213ENST00000587988 KIR2DL4Q99706 377 aa7.24□□□□□ -1.25
SMARCA4-213ENST00000587988 TRGC2P03986 189 aa7.23□□□□□ -1.25
SMARCA4-213ENST00000587988 RAB5AP20339 215 aa7.23□□□□□ -1.25
SMARCA4-213ENST00000587988 FCER1GP30273 86 aa7.23□□□□□ -1.25
SMARCA4-213ENST00000587988 IFI27P40305 119 aaPredicted RBP7.23□□□□□ -1.25
SMARCA4-213ENST00000587988 Q8N8P6 123 aa7.23□□□□□ -1.25
SMARCA4-213ENST00000587988 Q8N976 141 aa7.23□□□□□ -1.25
SMARCA4-213ENST00000587988 IGLV4-60A0A075B6I1 120 aa7.22□□□□□ -1.25
SMARCA4-213ENST00000587988 TRAV9-2A0A087WT02 112 aa7.22□□□□□ -1.25
SMARCA4-213ENST00000587988 A0A087WX48 190 aa7.22□□□□□ -1.25
SMARCA4-213ENST00000587988 UBE2L6O14933 153 aa7.22□□□□□ -1.25
SMARCA4-213ENST00000587988 RBX1P62877 108 aa7.22□□□□□ -1.25
SMARCA4-213ENST00000587988 TTC32Q5I0X7 151 aa7.22□□□□□ -1.25
SMARCA4-213ENST00000587988 IBA57-AS1B1ANH7 110 aa7.21□□□□□ -1.26
SMARCA4-213ENST00000587988 C20orf203Q8NBC4 194 aa7.21□□□□□ -1.26
SMARCA4-213ENST00000587988 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
SMARCA4-213ENST00000587988 NXT2Q9NPJ8 142 aaKnown RBP7.21□□□□□ -1.26
SMARCA4-213ENST00000587988 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
SMARCA4-213ENST00000587988 A0A1B0GUV1 79 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 H7C423 109 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 ANGP03950 147 aaKnown RBP7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 FGF6P10767 208 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 PKIAP61925 76 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 RPL39P62891 51 aaKnown RBP7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 C10orf126Q8N4M7 172 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 PRSS3P2Q8NHM4 247 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 URB1-AS1Q96HZ7 61 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 RYR2Q92736 4967 aa7.2□□□□□ -1.26
SMARCA4-213ENST00000587988 K7EP13 123 aa7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 LAGE3Q14657 143 aa7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 AMMECR1LQ6DCA0 310 aa7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 UBE2D4Q9Y2X8 147 aa7.19□□□□□ -1.26
SMARCA4-213ENST00000587988 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 RTL8CO15255 209 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 CLPSL2Q6UWE3 100 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 ENHOQ6UWT2 76 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 LINC00269Q8N2A0 174 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 UBE2WQ96B02 151 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 Q9HAA7 133 aa7.18□□□□□ -1.26
SMARCA4-213ENST00000587988 K7EMI3 77 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 LINC00614P0C842 121 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 ORMDL2Q53FV1 153 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 FA2HQ7L5A8 372 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 TMEM18Q96B42 140 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 DNAH2Q9P225 4427 aa7.17□□□□□ -1.26
SMARCA4-213ENST00000587988 RYR3Q15413 4870 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 ZNF25P17030 456 aaPredicted RBP7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 BTF3P20290 206 aaKnown RBP7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 REG3AQ06141 175 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 C2orf66Q6UXQ4 117 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 TMEM101Q96IK0 257 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 CDC42SE2Q9NRR3 84 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 PRR34Q9NV39 138 aa7.16□□□□□ -1.26
SMARCA4-213ENST00000587988 TRAV8-3A0A0A6YYJ7 113 aa7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 CRPP02741 224 aa7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 RNASE13Q5GAN3 156 aaKnown RBP7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 Q6ZUT4 128 aa7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 CSDC2Q9Y534 153 aaKnown RBP7.15□□□□□ -1.26
SMARCA4-213ENST00000587988 FRAS1Q86XX4 4008 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms