RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 INAFM2P0DMQ5 153 aa13.09□□□□□ -0.31
TRAPPC6A-203ENST00000587818 MIAQ16674 131 aa13.09□□□□□ -0.31
TRAPPC6A-203ENST00000587818 SMIM15Q7Z3B0 74 aa13.09□□□□□ -0.31
TRAPPC6A-203ENST00000587818 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
TRAPPC6A-203ENST00000587818 USP17L23D6RBM5 183 aa13.08□□□□□ -0.32
TRAPPC6A-203ENST00000587818 COTL1Q14019 142 aa13.08□□□□□ -0.32
TRAPPC6A-203ENST00000587818 KRTAP26-1Q6PEX3 210 aa13.08□□□□□ -0.32
TRAPPC6A-203ENST00000587818 C9JQL5 133 aa13.07□□□□□ -0.32
TRAPPC6A-203ENST00000587818 GAS8-AS1O95177 125 aa13.07□□□□□ -0.32
TRAPPC6A-203ENST00000587818 AMTP48728 403 aa13.07□□□□□ -0.32
TRAPPC6A-203ENST00000587818 REG3AQ06141 175 aa13.07□□□□□ -0.32
TRAPPC6A-203ENST00000587818 FAM229AH3BQW9 127 aa13.06□□□□□ -0.32
TRAPPC6A-203ENST00000587818 SRSF3P84103 164 aaKnown RBP13.06□□□□□ -0.32
TRAPPC6A-203ENST00000587818 CT83Q5H943 113 aa13.06□□□□□ -0.32
TRAPPC6A-203ENST00000587818 OSTCQ9NRP0 149 aa13.06□□□□□ -0.32
TRAPPC6A-203ENST00000587818 UBE2L6O14933 153 aa13.05□□□□□ -0.32
TRAPPC6A-203ENST00000587818 NDUFS6O75380 124 aaKnown RBP13.05□□□□□ -0.32
TRAPPC6A-203ENST00000587818 PRSS1P07477 247 aa13.05□□□□□ -0.32
TRAPPC6A-203ENST00000587818 Q6ZSA8 131 aa13.05□□□□□ -0.32
TRAPPC6A-203ENST00000587818 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
TRAPPC6A-203ENST00000587818 BORCS7Q96B45 105 aa13.05□□□□□ -0.32
TRAPPC6A-203ENST00000587818 A0A1B0GUV1 79 aa13.04□□□□□ -0.32
TRAPPC6A-203ENST00000587818 HIGD1CA8MV81 97 aa13.04□□□□□ -0.32
TRAPPC6A-203ENST00000587818 TMEM241Q24JQ0 296 aa13.04□□□□□ -0.32
TRAPPC6A-203ENST00000587818 C14orf177Q52M58 125 aa13.04□□□□□ -0.32
TRAPPC6A-203ENST00000587818 TEX261Q6UWH6 196 aa13.03□□□□□ -0.32
TRAPPC6A-203ENST00000587818 V9GYV3 84 aa13.03□□□□□ -0.32
TRAPPC6A-203ENST00000587818 A0A1B0GUT8 65 aa13.02□□□□□ -0.33
TRAPPC6A-203ENST00000587818 SDHAF1A6NFY7 115 aa13.02□□□□□ -0.33
TRAPPC6A-203ENST00000587818 RPL23P62829 140 aaKnown RBP13.02□□□□□ -0.33
TRAPPC6A-203ENST00000587818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6A-203ENST00000587818 IGKV3OR2-268A0A0C4DH90 116 aa13.01□□□□□ -0.33
TRAPPC6A-203ENST00000587818 IGKV2-29A2NJV5 120 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6A-203ENST00000587818 ISOC2Q96AB3 205 aa13.01□□□□□ -0.33
TRAPPC6A-203ENST00000587818 RNF185Q96GF1 192 aa13.01□□□□□ -0.33
TRAPPC6A-203ENST00000587818 PMCHP20382 165 aa13□□□□□ -0.33
TRAPPC6A-203ENST00000587818 ADIRFQ15847 76 aa13□□□□□ -0.33
TRAPPC6A-203ENST00000587818 SCXQ7RTU7 201 aa13□□□□□ -0.33
TRAPPC6A-203ENST00000587818 NUP35Q8NFH5 326 aa13□□□□□ -0.33
TRAPPC6A-203ENST00000587818 RAB4AP20338 218 aa12.99□□□□□ -0.33
TRAPPC6A-203ENST00000587818 PEA15Q15121 130 aa12.99□□□□□ -0.33
TRAPPC6A-203ENST00000587818 FAM74A3Q4VXF1 159 aa12.99□□□□□ -0.33
TRAPPC6A-203ENST00000587818 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
TRAPPC6A-203ENST00000587818 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
TRAPPC6A-203ENST00000587818 SRRM2Q9UQ35 2752 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6A-203ENST00000587818 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 APCSP02743 223 aa12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 RPS10P46783 165 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 RNASEKQ6P5S7 137 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 ST20Q9HBF5 79 aa12.98□□□□□ -0.33
TRAPPC6A-203ENST00000587818 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 I3L3M4 83 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 NCR2O95944 276 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 RIGQ13278 110 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 AMMECR1LQ6DCA0 310 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 CHAC1Q9BUX1 264 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 NAT8Q9UHE5 227 aa12.97□□□□□ -0.33
TRAPPC6A-203ENST00000587818 FLG2Q5D862 2391 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC6A-203ENST00000587818 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.33
TRAPPC6A-203ENST00000587818 GAGE12HA6NDE8 117 aa12.95□□□□□ -0.34
TRAPPC6A-203ENST00000587818 FGF6P10767 208 aa12.95□□□□□ -0.34
TRAPPC6A-203ENST00000587818 DGAT2L7PQ6IED9 249 aa12.95□□□□□ -0.34
TRAPPC6A-203ENST00000587818 CIRBP-AS1Q8TBR5 109 aa12.95□□□□□ -0.34
TRAPPC6A-203ENST00000587818 TMEM242Q9NWH2 141 aa12.95□□□□□ -0.34
TRAPPC6A-203ENST00000587818 hDV102S1A0JD36 115 aa12.94□□□□□ -0.34
TRAPPC6A-203ENST00000587818 TSHBP01222 138 aa12.94□□□□□ -0.34
TRAPPC6A-203ENST00000587818 C9orf163Q8N9P6 203 aa12.94□□□□□ -0.34
TRAPPC6A-203ENST00000587818 NAT8BQ9UHF3 227 aa12.94□□□□□ -0.34
TRAPPC6A-203ENST00000587818 POLR2KP53803 58 aaKnown RBP12.93□□□□□ -0.34
TRAPPC6A-203ENST00000587818 CLRN3Q8NCR9 226 aa12.93□□□□□ -0.34
TRAPPC6A-203ENST00000587818 SLPIP03973 132 aa12.92□□□□□ -0.34
TRAPPC6A-203ENST00000587818 ESDP10768 282 aa12.92□□□□□ -0.34
TRAPPC6A-203ENST00000587818 MRAP2Q96G30 205 aa12.92□□□□□ -0.34
TRAPPC6A-203ENST00000587818 SMIM27A0A1W2PRY6 76 aa12.91□□□□□ -0.34
TRAPPC6A-203ENST00000587818 H7C423 109 aa12.91□□□□□ -0.34
TRAPPC6A-203ENST00000587818 PLA2G1BP04054 148 aaKnown RBP12.91□□□□□ -0.34
TRAPPC6A-203ENST00000587818 CAMPP49913 170 aa12.91□□□□□ -0.34
TRAPPC6A-203ENST00000587818 MRPL51Q4U2R6 128 aaKnown RBP12.9□□□□□ -0.34
TRAPPC6A-203ENST00000587818 CHCHD10Q8WYQ3 142 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC6A-203ENST00000587818 SMDT1Q9H4I9 107 aa12.9□□□□□ -0.34
TRAPPC6A-203ENST00000587818 PANO1I0J062 215 aa12.89□□□□□ -0.35
TRAPPC6A-203ENST00000587818 SDIM1Q6ZPB5 146 aa12.89□□□□□ -0.35
TRAPPC6A-203ENST00000587818 NRACQ8N912 160 aa12.89□□□□□ -0.35
TRAPPC6A-203ENST00000587818 TRBV27A0A0K0K1C4 114 aa12.88□□□□□ -0.35
TRAPPC6A-203ENST00000587818 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
TRAPPC6A-203ENST00000587818 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
TRAPPC6A-203ENST00000587818 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
TRAPPC6A-203ENST00000587818 AP5S1Q9NUS5 200 aa12.88□□□□□ -0.35
TRAPPC6A-203ENST00000587818 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC6A-203ENST00000587818 VCYO14598 125 aa12.87□□□□□ -0.35
TRAPPC6A-203ENST00000587818 HIGD2BQ4VC39 106 aa12.87□□□□□ -0.35
TRAPPC6A-203ENST00000587818 MRPL54Q6P161 138 aaKnown RBP12.87□□□□□ -0.35
TRAPPC6A-203ENST00000587818 C15orf56Q8N910 161 aa12.87□□□□□ -0.35
TRAPPC6A-203ENST00000587818 OR5A1Q8NGJ0 315 aa12.87□□□□□ -0.35
TRAPPC6A-203ENST00000587818 HERC1Q15751 4861 aa12.87□□□□□ -0.35
TRAPPC6A-203ENST00000587818 MYCBP2O75592 4640 aa12.86□□□□□ -0.35
TRAPPC6A-203ENST00000587818 ZNF25P17030 456 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC6A-203ENST00000587818 CNBPP62633 177 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms