RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 RETNQ9HD89 108 aa7.47□□□□□ -1.21
ZNF540-203ENST00000586134 LYNX1G3V0Z9 82 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 IGHV1-46P01743 117 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 MSMBP08118 114 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 LYNX1P0DP58 116 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
ZNF540-203ENST00000586134 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-203ENST00000586134 LINC00482Q8N8I6 264 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 NRACQ8N912 160 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 DNHD1Q96M86 4753 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 WNK2Q9Y3S1 2297 aa7.46□□□□□ -1.22
ZNF540-203ENST00000586134 IGHV3-43A0A0B4J1X8 118 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 IGHV3-43DP0DP04 118 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 MUSTN1Q8IVN3 82 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 AMELXQ99217 191 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 GNG12Q9UBI6 72 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 M0R3E3 92 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-203ENST00000586134 RPL39P5Q59GN2 51 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 FAM222AQ5U5X8 452 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 SMIM2Q9BVW6 85 aa7.45□□□□□ -1.22
ZNF540-203ENST00000586134 TRBV19A0A075B6N1 114 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 BCE1O60756 84 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 DLX1P56177 255 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 SLC50A1Q9BRV3 221 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 NDUFA4L2Q9NRX3 87 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 TRAV26-2A0A0B4J265 109 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 IGHV1-69DA0A0B4J2H0 117 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 GAS8-AS1O95177 125 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 Q6ZRU5 148 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
ZNF540-203ENST00000586134 SPRY3O43610 288 aa7.43□□□□□ -1.22
ZNF540-203ENST00000586134 UBE2E1P51965 193 aa7.43□□□□□ -1.22
ZNF540-203ENST00000586134 C17orf77Q96MU5 243 aa7.43□□□□□ -1.22
ZNF540-203ENST00000586134 CTSZQ9UBR2 303 aa7.43□□□□□ -1.22
ZNF540-203ENST00000586134 RBMY1BA6NDE4 496 aaKnown RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 RBMY1EA6NEQ0 496 aaKnown RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 LEPROTO15243 131 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 RBMY1DP0C7P1 496 aaKnown RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 RBMY1A1P0DJD3 496 aaKnown RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 RBMY1CP0DJD4 496 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 EGR2P11161 476 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 GATA1P15976 413 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 RBMY1FQ15415 496 aaKnown RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 C8orf49Q96NF6 230 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 SPRY2O43597 315 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 CFHR3Q02985 330 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 KRTAP24-1Q3LI83 254 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 ZNF491Q8N8L2 437 aa7.42□□□□□ -1.22
ZNF540-203ENST00000586134 FAM110DQ8TAY7 271 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-203ENST00000586134 IGLV4-69A0A075B6H9 119 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 H3BTX0 84 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 XCL1P47992 114 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 PDE6HQ13956 83 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 C2orf66Q6UXQ4 117 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
ZNF540-203ENST00000586134 DYNAPQ8N1N2 210 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 CCL17Q92583 94 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 DAZ1Q9NQZ3 744 aaKnown RBP7.41□□□□□ -1.22
ZNF540-203ENST00000586134 MSRB1Q9NZV6 116 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 XCL2Q9UBD3 114 aa7.41□□□□□ -1.22
ZNF540-203ENST00000586134 FSHBP01225 129 aa7.4□□□□□ -1.22
ZNF540-203ENST00000586134 PRSS2P07478 247 aa7.4□□□□□ -1.22
ZNF540-203ENST00000586134 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
ZNF540-203ENST00000586134 WDR86Q86TI4 376 aa7.4□□□□□ -1.22
ZNF540-203ENST00000586134 CLEC2BQ92478 149 aa7.4□□□□□ -1.22
ZNF540-203ENST00000586134 CUBNO60494 3623 aa7.4□□□□□ -1.22
ZNF540-203ENST00000586134 H7BZZ5 65 aa7.4□□□□□ -1.23
ZNF540-203ENST00000586134 I3L3M4 83 aa7.4□□□□□ -1.23
ZNF540-203ENST00000586134 PVRIGQ6DKI7 326 aa7.4□□□□□ -1.23
ZNF540-203ENST00000586134 FAM223AQ8IWN6 122 aa7.4□□□□□ -1.23
ZNF540-203ENST00000586134 TMEM141Q96I45 108 aa7.4□□□□□ -1.23
ZNF540-203ENST00000586134 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 IGHV3OR16-10A0A075B7F0 116 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 TRBV7-6A0A0J9YX20 115 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 FAM223BA6NKX1 122 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 STHQ8IWL8 128 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 FANCD2OSQ96PS1 177 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 UBE2D4Q9Y2X8 147 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 IGHV4-4A0A075B6R2 117 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 DAZ2Q13117 558 aaKnown RBP7.39□□□□□ -1.23
ZNF540-203ENST00000586134 ATP5EP2Q5VTU8 51 aa7.39□□□□□ -1.23
ZNF540-203ENST00000586134 DAZ3Q9NR90 486 aaKnown RBP7.39□□□□□ -1.23
ZNF540-203ENST00000586134 ANK2Q01484 3957 aa7.38□□□□□ -1.23
ZNF540-203ENST00000586134 PLAC8L1A1L4L8 177 aa7.38□□□□□ -1.23
ZNF540-203ENST00000586134 NDUFC1O43677 76 aa7.38□□□□□ -1.23
ZNF540-203ENST00000586134 PPP1R17O96001 155 aa7.38□□□□□ -1.23
ZNF540-203ENST00000586134 HILS1P60008 231 aa7.38□□□□□ -1.23
ZNF540-203ENST00000586134 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-203ENST00000586134 SAA1P0DJI8 122 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-203ENST00000586134 SAA2P0DJI9 122 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-203ENST00000586134 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
ZNF540-203ENST00000586134 CCKP06307 115 aa7.37□□□□□ -1.23
ZNF540-203ENST00000586134 KLKP1Q107X0 134 aa7.37□□□□□ -1.23
ZNF540-203ENST00000586134 TMEM30BQ3MIR4 351 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms