RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NUDT3O95989 172 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 DEFB130BP0DP73 79 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 DEFB130AP0DP74 79 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 NANOS2P60321 138 aaKnown RBP8.91□□□□□ -0.98
VMP1-202ENST00000585847 C12orf74Q32Q52 190 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 NEXN-AS1Q8NBZ9 246 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 MAP1LC3CQ9BXW4 147 aa8.91□□□□□ -0.98
VMP1-202ENST00000585847 NUPR1O60356 82 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 GAS8-AS1O95177 125 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 COTL1Q14019 142 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 FHL2Q14192 279 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
VMP1-202ENST00000585847 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 GTSF1LQ9H1H1 148 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
VMP1-202ENST00000585847 NACAE9PAV3 2078 aa8.9□□□□□ -0.99
VMP1-202ENST00000585847 H7C423 109 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 BTF3P20290 206 aaKnown RBP8.89□□□□□ -0.99
VMP1-202ENST00000585847 CRYBA4P53673 196 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 UBE2D3P61077 147 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 UBE2D2P62837 147 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 C11orf45Q8TAV5 145 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 TOMM6Q96B49 74 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
VMP1-202ENST00000585847 IGHV3-73A0A0B4J1V6 119 aa8.88□□□□□ -0.99
VMP1-202ENST00000585847 PKIAP61925 76 aa8.88□□□□□ -0.99
VMP1-202ENST00000585847 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
VMP1-202ENST00000585847 Q6ZTC4 211 aa8.88□□□□□ -0.99
VMP1-202ENST00000585847 STARD9Q9P2P6 4700 aa8.88□□□□□ -0.99
VMP1-202ENST00000585847 A0A096LNJ9 63 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.87□□□□□ -0.99
VMP1-202ENST00000585847 TSHBP01222 138 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 LINC00694P0DN24 101 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 C2orf66Q6UXQ4 117 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 ERASQ7Z444 233 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 FAM19A2Q8N3H0 131 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 SPANXA1Q9NS26 97 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 PYGO1Q9Y3Y4 419 aa8.87□□□□□ -0.99
VMP1-202ENST00000585847 Q6ZSN1 163 aa8.86□□□□□ -0.99
VMP1-202ENST00000585847 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
VMP1-202ENST00000585847 IFI27L1Q96BM0 104 aa8.86□□□□□ -0.99
VMP1-202ENST00000585847 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
VMP1-202ENST00000585847 CSMD3Q7Z407 3707 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 SYS1-DBNDD2H3BUS1 97 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 PAX4O43316 350 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 TIRAPP58753 221 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 KRTDAPP60985 99 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 SACSQ9NZJ4 4579 aa8.85□□□□□ -0.99
VMP1-202ENST00000585847 LYSTQ99698 3801 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 TRAV12-1A0A0B4J245 112 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 S100A12P80511 92 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
VMP1-202ENST00000585847 LGALS9CQ6DKI2 356 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 Q6ZN92 141 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 PHLDA1Q8WV24 401 aaPredicted RBP8.84□□□□□ -0.99
VMP1-202ENST00000585847 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
VMP1-202ENST00000585847 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
VMP1-202ENST00000585847 TRBV25-1A0A075B6N4 114 aa8.83□□□□□ -1
VMP1-202ENST00000585847 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
VMP1-202ENST00000585847 ICOSQ9Y6W8 199 aa8.83□□□□□ -1
VMP1-202ENST00000585847 GAGE12JA6NER3 117 aa8.82□□□□□ -1
VMP1-202ENST00000585847 F5H768 121 aa8.82□□□□□ -1
VMP1-202ENST00000585847 SCGB1D1O95968 90 aa8.82□□□□□ -1
VMP1-202ENST00000585847 P0DMU3 169 aa8.82□□□□□ -1
VMP1-202ENST00000585847 FAM231AP0DMU4 169 aa8.82□□□□□ -1
VMP1-202ENST00000585847 FAM231CP0DMU5 169 aa8.82□□□□□ -1
VMP1-202ENST00000585847 GYPEP15421 78 aa8.82□□□□□ -1
VMP1-202ENST00000585847 GAGE1Q13065 139 aa8.82□□□□□ -1
VMP1-202ENST00000585847 GAGE4Q13068 117 aa8.82□□□□□ -1
VMP1-202ENST00000585847 GAGE5Q13069 117 aa8.82□□□□□ -1
VMP1-202ENST00000585847 GAGE13Q4V321 117 aa8.82□□□□□ -1
VMP1-202ENST00000585847 PYY3Q5JQD4 70 aa8.82□□□□□ -1
VMP1-202ENST00000585847 LINC01545Q5VT33 79 aa8.82□□□□□ -1
VMP1-202ENST00000585847 MRPL52Q86TS9 123 aaKnown RBP8.82□□□□□ -1
VMP1-202ENST00000585847 PLECQ15149 4684 aaKnown RBP8.82□□□□□ -1
VMP1-202ENST00000585847 DNAH1Q9P2D7 4330 aa8.81□□□□□ -1
VMP1-202ENST00000585847 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
VMP1-202ENST00000585847 IGIPA6NJ69 53 aa8.81□□□□□ -1
VMP1-202ENST00000585847 PLNP26678 52 aa8.81□□□□□ -1
VMP1-202ENST00000585847 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
VMP1-202ENST00000585847 CEMP1Q6PRD7 247 aaPredicted RBP8.81□□□□□ -1
VMP1-202ENST00000585847 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
VMP1-202ENST00000585847 ATP6V0E2Q8NHE4 81 aa8.81□□□□□ -1
VMP1-202ENST00000585847 TMEM243Q9BU79 118 aa8.81□□□□□ -1
VMP1-202ENST00000585847 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
VMP1-202ENST00000585847 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
VMP1-202ENST00000585847 C12orf57Q99622 126 aa8.8□□□□□ -1
VMP1-202ENST00000585847 HSBP1L1C9JCN9 74 aa8.79□□□□□ -1
VMP1-202ENST00000585847 UBE2L6O14933 153 aa8.79□□□□□ -1
VMP1-202ENST00000585847 PRSS1P07477 247 aa8.79□□□□□ -1
VMP1-202ENST00000585847 TEX43Q6ZNM6 134 aa8.79□□□□□ -1
VMP1-202ENST00000585847 NEGR1Q7Z3B1 354 aa8.79□□□□□ -1
VMP1-202ENST00000585847 C15orf53Q8NAA6 179 aa8.79□□□□□ -1
VMP1-202ENST00000585847 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
VMP1-202ENST00000585847 A0A087WX48 190 aa8.78□□□□□ -1
VMP1-202ENST00000585847 HTN3P15516 51 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms