RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 A0A087WX48 190 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 TRBV6-4A0A1B0GX49 114 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 H0Y8G0 127 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 K7EQD1 137 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 GAGE7O76087 117 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 TSHBP01222 138 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 IGHV4-30-4P0DP06 118 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 MIFP14174 115 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 ZNF479Q96JC4 524 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 LYSTQ99698 3801 aa7.41□□□□□ -1.22
LIG3-203ENST00000585370 TRBV7-3A0A075B6L6 115 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 IGIPA6NJ69 53 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 CRYBA4P53673 196 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 COTL1Q14019 142 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 ODF1Q14990 250 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 Q6ZSN1 163 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 NEGR1Q7Z3B1 354 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 DAZ4Q86SG3 579 aaKnown RBP7.4□□□□□ -1.22
LIG3-203ENST00000585370 ATOH7Q8N100 152 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 C20orf203Q8NBC4 194 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 RNF183Q96D59 192 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 DAZ3Q9NR90 486 aaKnown RBP7.4□□□□□ -1.22
LIG3-203ENST00000585370 UQCR10Q9UDW1 63 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 TP53TG1Q9Y2A0 90 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 PYGO1Q9Y3Y4 419 aa7.4□□□□□ -1.22
LIG3-203ENST00000585370 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 DPM2O94777 84 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 IGKCP01834 107 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 PLNP26678 52 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 OR11H2Q8NH07 326 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 PMCHL2Q9BQD1 86 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 PRADC1Q9BSG0 188 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 STARD9Q9P2P6 4700 aa7.39□□□□□ -1.23
LIG3-203ENST00000585370 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 TEX48A0A1B0GUV7 120 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 LINC00587B1AMM8 73 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 F8VRH5 84 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 P0DMU3 169 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 FAM231AP0DMU4 169 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 FAM231CP0DMU5 169 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 IGLC3P0DOY3 106 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 PMVKQ15126 192 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 TMEM97Q5BJF2 176 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 MRPL52Q86TS9 123 aaKnown RBP7.38□□□□□ -1.23
LIG3-203ENST00000585370 SLC25A29Q8N8R3 303 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 ZNRF2Q8NHG8 242 aa7.38□□□□□ -1.23
LIG3-203ENST00000585370 C3orf84H3BNL1 204 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 EMP1P54849 157 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 UBE2D3P61077 147 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 UBE2D2P62837 147 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 FHL2Q14192 279 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 DEFB135Q30KP9 77 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 SBSPONQ8IVN8 264 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 TIMM21Q9BVV7 248 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 GTSF1LQ9H1H1 148 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 SPANXA1Q9NS26 97 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 DKK2Q9UBU2 259 aa7.37□□□□□ -1.23
LIG3-203ENST00000585370 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
LIG3-203ENST00000585370 hDV102S1A0JD36 115 aa7.36□□□□□ -1.23
LIG3-203ENST00000585370 PRSS29PA6NIE9 313 aa7.36□□□□□ -1.23
LIG3-203ENST00000585370 NACAE9PAV3 2078 aa7.36□□□□□ -1.23
LIG3-203ENST00000585370 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
LIG3-203ENST00000585370 IGHV4-28A0A0C4DH34 117 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 H7C423 109 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 DEFB130BP0DP73 79 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 DEFB130AP0DP74 79 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
LIG3-203ENST00000585370 MAJINQ3KP22 176 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 CASC10Q5T4H9 136 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 SLC25A34Q6PIV7 304 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 Q8NAQ8 132 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 VCX2Q9H322 139 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 CST9LQ9H4G1 147 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
LIG3-203ENST00000585370 HHLA3Q9XRX5 114 aa7.35□□□□□ -1.23
LIG3-203ENST00000585370 GAGE12JA6NER3 117 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 DLEU1O43261 78 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 COX8AP10176 69 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 DAD1P61803 113 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 GAGE1Q13065 139 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 GAGE4Q13068 117 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 GAGE5Q13069 117 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 GAGE13Q4V321 117 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 MUC7Q8TAX7 377 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 C14orf144Q96I85 54 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 PRO0255Q9UI72 69 aa7.34□□□□□ -1.23
LIG3-203ENST00000585370 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
LIG3-203ENST00000585370 HNRNPA3P51991 378 aaKnown RBP7.33□□□□□ -1.24
LIG3-203ENST00000585370 MRPS36P82909 103 aaKnown RBP7.33□□□□□ -1.24
LIG3-203ENST00000585370 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
LIG3-203ENST00000585370 PHLDA1Q8WV24 401 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms