RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 C9orf62Q8N4C0 152 aa13.14□□□□□ -0.31
TOP3A-219ENST00000584887 PGLYRP4Q96LB8 373 aa13.14□□□□□ -0.31
TOP3A-219ENST00000584887 RNASE7Q9H1E1 156 aaKnown RBP13.14□□□□□ -0.31
TOP3A-219ENST00000584887 RPP21Q9H633 154 aaKnown RBP13.14□□□□□ -0.31
TOP3A-219ENST00000584887 TRAV26-2A0A0B4J265 109 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 A0A1B0GUV1 79 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 PANO1I0J062 215 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 TCTE3Q8IZS6 198 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
TOP3A-219ENST00000584887 OXTP01178 125 aa13.12□□□□□ -0.31
TOP3A-219ENST00000584887 TAGLN2P37802 199 aaKnown RBP13.12□□□□□ -0.31
TOP3A-219ENST00000584887 K7EN84 100 aa13.11□□□□□ -0.31
TOP3A-219ENST00000584887 SDIM1Q6ZPB5 146 aa13.11□□□□□ -0.31
TOP3A-219ENST00000584887 CNBPP62633 177 aaKnown RBP13.1□□□□□ -0.31
TOP3A-219ENST00000584887 GATD1Q8NB37 220 aa13.1□□□□□ -0.31
TOP3A-219ENST00000584887 OCC1Q8TAD7 63 aa13.1□□□□□ -0.31
TOP3A-219ENST00000584887 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
TOP3A-219ENST00000584887 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
TOP3A-219ENST00000584887 AMMECR1LQ6DCA0 310 aa13.09□□□□□ -0.31
TOP3A-219ENST00000584887 SMIM15Q7Z3B0 74 aa13.09□□□□□ -0.31
TOP3A-219ENST00000584887 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
TOP3A-219ENST00000584887 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-219ENST00000584887 GAGE12HA6NDE8 117 aa13.08□□□□□ -0.32
TOP3A-219ENST00000584887 HNRNPA3P51991 378 aaKnown RBP13.08□□□□□ -0.32
TOP3A-219ENST00000584887 RPL39LQ96EH5 51 aaKnown RBP13.08□□□□□ -0.32
TOP3A-219ENST00000584887 CHTF8P0CG12 524 aa13.06□□□□□ -0.32
TOP3A-219ENST00000584887 CEBPGP53567 150 aa13.06□□□□□ -0.32
TOP3A-219ENST00000584887 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-219ENST00000584887 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
TOP3A-219ENST00000584887 Q6ZNX1 250 aa13.06□□□□□ -0.32
TOP3A-219ENST00000584887 GTSF1Q8WW33 167 aa13.06□□□□□ -0.32
TOP3A-219ENST00000584887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-219ENST00000584887 IGKV2-29A2NJV5 120 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-219ENST00000584887 GATCO43716 136 aaKnown RBP13.05□□□□□ -0.32
TOP3A-219ENST00000584887 SLPIP03973 132 aa13.05□□□□□ -0.32
TOP3A-219ENST00000584887 SERTAD4-AS1Q5TG53 156 aa13.05□□□□□ -0.32
TOP3A-219ENST00000584887 APCSP02743 223 aa13.04□□□□□ -0.32
TOP3A-219ENST00000584887 HIGD2BQ4VC39 106 aa13.04□□□□□ -0.32
TOP3A-219ENST00000584887 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
TOP3A-219ENST00000584887 ALKAL2Q6UX46 152 aa13.03□□□□□ -0.32
TOP3A-219ENST00000584887 C15orf56Q8N910 161 aa13.03□□□□□ -0.32
TOP3A-219ENST00000584887 LRP1Q07954 4544 aaKnown RBP13.02□□□□□ -0.33
TOP3A-219ENST00000584887 SDHAF1A6NFY7 115 aa13.02□□□□□ -0.33
TOP3A-219ENST00000584887 NCR2O95944 276 aa13.02□□□□□ -0.33
TOP3A-219ENST00000584887 BLOC1S1P78537 153 aa13.02□□□□□ -0.33
TOP3A-219ENST00000584887 CIRBPQ14011 172 aaKnown RBP13.02□□□□□ -0.33
TOP3A-219ENST00000584887 CHCHD10Q8WYQ3 142 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-219ENST00000584887 A0A087WYN8 130 aa13.01□□□□□ -0.33
TOP3A-219ENST00000584887 A8MWL6 223 aa13.01□□□□□ -0.33
TOP3A-219ENST00000584887 TMEM250H0YL14 139 aa13.01□□□□□ -0.33
TOP3A-219ENST00000584887 FGF6P10767 208 aa13.01□□□□□ -0.33
TOP3A-219ENST00000584887 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
TOP3A-219ENST00000584887 hCG_2014768A0A024R1R8 64 aa13□□□□□ -0.33
TOP3A-219ENST00000584887 PMCHP20382 165 aa13□□□□□ -0.33
TOP3A-219ENST00000584887 AKAP14Q86UN6 197 aa13□□□□□ -0.33
TOP3A-219ENST00000584887 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
TOP3A-219ENST00000584887 BORCS7Q96B45 105 aa13□□□□□ -0.33
TOP3A-219ENST00000584887 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
TOP3A-219ENST00000584887 H7C423 109 aa12.98□□□□□ -0.33
TOP3A-219ENST00000584887 RPS10P46783 165 aaKnown RBP12.98□□□□□ -0.33
TOP3A-219ENST00000584887 COX6A2Q02221 97 aa12.98□□□□□ -0.33
TOP3A-219ENST00000584887 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
TOP3A-219ENST00000584887 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
TOP3A-219ENST00000584887 I3L3M4 83 aa12.97□□□□□ -0.33
TOP3A-219ENST00000584887 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
TOP3A-219ENST00000584887 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
TOP3A-219ENST00000584887 XCL1P47992 114 aa12.96□□□□□ -0.33
TOP3A-219ENST00000584887 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
TOP3A-219ENST00000584887 TMEM101Q96IK0 257 aa12.96□□□□□ -0.33
TOP3A-219ENST00000584887 SMIM7Q9BQ49 75 aa12.96□□□□□ -0.33
TOP3A-219ENST00000584887 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
TOP3A-219ENST00000584887 TMEM242Q9NWH2 141 aa12.96□□□□□ -0.33
TOP3A-219ENST00000584887 GAS8-AS1O95177 125 aa12.95□□□□□ -0.34
TOP3A-219ENST00000584887 CT83Q5H943 113 aa12.95□□□□□ -0.34
TOP3A-219ENST00000584887 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
TOP3A-219ENST00000584887 EIF5A2Q9GZV4 153 aaKnown RBP12.95□□□□□ -0.34
TOP3A-219ENST00000584887 FAM231BA6NCW3 169 aa12.94□□□□□ -0.34
TOP3A-219ENST00000584887 ZNF25P17030 456 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-219ENST00000584887 FOXI1Q12951 378 aa12.94□□□□□ -0.34
TOP3A-219ENST00000584887 PRSS3P2Q8NHM4 247 aa12.94□□□□□ -0.34
TOP3A-219ENST00000584887 C7orf33Q8WU49 177 aa12.94□□□□□ -0.34
TOP3A-219ENST00000584887 PLAC8Q9NZF1 115 aa12.94□□□□□ -0.34
TOP3A-219ENST00000584887 PKHD1L1Q86WI1 4243 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 GVQW2A0A096LPI5 108 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-219ENST00000584887 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 HIGD1CA8MV81 97 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 PHOX2AO14813 284 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 NDUFS6O75380 124 aaKnown RBP12.93□□□□□ -0.34
TOP3A-219ENST00000584887 TSHBP01222 138 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 FAT3Q8TDW7 4589 aa12.93□□□□□ -0.34
TOP3A-219ENST00000584887 CCL25O15444 150 aa12.92□□□□□ -0.34
TOP3A-219ENST00000584887 Q6ZRU5 148 aa12.92□□□□□ -0.34
TOP3A-219ENST00000584887 LYPD6BQ8NI32 183 aa12.92□□□□□ -0.34
TOP3A-219ENST00000584887 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
TOP3A-219ENST00000584887 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
TOP3A-219ENST00000584887 LINC01551Q86U37 167 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms