RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 TMEM97Q5BJF2 176 aa8.08□□□□□ -1.12
CDRT1-207ENST00000583965 PDZD11Q5EBL8 140 aa8.08□□□□□ -1.12
CDRT1-207ENST00000583965 GTSF1LQ9H1H1 148 aa8.08□□□□□ -1.12
CDRT1-207ENST00000583965 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
CDRT1-207ENST00000583965 SDHAF1A6NFY7 115 aa8.07□□□□□ -1.12
CDRT1-207ENST00000583965 HSBP1O75506 76 aa8.07□□□□□ -1.12
CDRT1-207ENST00000583965 FABP4P15090 132 aa8.07□□□□□ -1.12
CDRT1-207ENST00000583965 POLR2KP53803 58 aaKnown RBP8.07□□□□□ -1.12
CDRT1-207ENST00000583965 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
CDRT1-207ENST00000583965 NXT2Q9NPJ8 142 aaKnown RBP8.07□□□□□ -1.12
CDRT1-207ENST00000583965 IGLV2-18A0A075B6J9 118 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 TRBV27A0A0K0K1C4 114 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 AMTP48728 403 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 CCL18P55774 89 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 RNASEKQ6P5S7 137 aaKnown RBP8.06□□□□□ -1.12
CDRT1-207ENST00000583965 LYPD5Q6UWN5 251 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 Q8N8P6 123 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 PRSS3P2Q8NHM4 247 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 TMEM70Q9BUB7 260 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
CDRT1-207ENST00000583965 I3L3M4 83 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 K7EMI3 77 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 VCYO14598 125 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 TCAPO15273 167 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
CDRT1-207ENST00000583965 AKR1D1P51857 326 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 ESRGQ1W209 222 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 OR10D4PQ8NGN7 298 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 SMIM2Q9BVW6 85 aa8.05□□□□□ -1.12
CDRT1-207ENST00000583965 IGHV1-24A0A0C4DH33 117 aa8.04□□□□□ -1.12
CDRT1-207ENST00000583965 IGHV3-38A0A0C4DH36 116 aa8.04□□□□□ -1.12
CDRT1-207ENST00000583965 SMIM6P0DI80 62 aa8.04□□□□□ -1.12
CDRT1-207ENST00000583965 COTL1Q14019 142 aa8.04□□□□□ -1.12
CDRT1-207ENST00000583965 LELP1Q5T871 98 aa8.04□□□□□ -1.12
CDRT1-207ENST00000583965 KIR2DL4Q99706 377 aa8.04□□□□□ -1.12
CDRT1-207ENST00000583965 PLECQ15149 4684 aaKnown RBP8.04□□□□□ -1.12
CDRT1-207ENST00000583965 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
CDRT1-207ENST00000583965 LOC389332A0A1B0GUA5 103 aa8.03□□□□□ -1.12
CDRT1-207ENST00000583965 MRPS16Q9Y3D3 137 aaKnown RBP8.03□□□□□ -1.12
CDRT1-207ENST00000583965 TRBV25-1A0A075B6N4 114 aa8.02□□□□□ -1.13
CDRT1-207ENST00000583965 LGALS9CQ6DKI2 356 aa8.02□□□□□ -1.13
CDRT1-207ENST00000583965 UBE2DNLQ8IWF7 75 aa8.02□□□□□ -1.13
CDRT1-207ENST00000583965 FAM19A2Q8N3H0 131 aa8.02□□□□□ -1.13
CDRT1-207ENST00000583965 UPK3BQ9BT76 320 aa8.02□□□□□ -1.13
CDRT1-207ENST00000583965 LINC00588Q9Y4M8 146 aa8.02□□□□□ -1.13
CDRT1-207ENST00000583965 A0A096LNJ9 63 aa8.01□□□□□ -1.13
CDRT1-207ENST00000583965 TRAV8-6A0A0B4J262 113 aa8.01□□□□□ -1.13
CDRT1-207ENST00000583965 TSHBP01222 138 aa8.01□□□□□ -1.13
CDRT1-207ENST00000583965 HBDP02042 147 aa8.01□□□□□ -1.13
CDRT1-207ENST00000583965 FCER1GP30273 86 aa8.01□□□□□ -1.13
CDRT1-207ENST00000583965 JOSD1Q15040 202 aaPredicted RBP8.01□□□□□ -1.13
CDRT1-207ENST00000583965 NTM-AS1Q6ZSK4 140 aa8.01□□□□□ -1.13
CDRT1-207ENST00000583965 PKIAP61925 76 aa8□□□□□ -1.13
CDRT1-207ENST00000583965 LAGE3Q14657 143 aa8□□□□□ -1.13
CDRT1-207ENST00000583965 PYY3Q5JQD4 70 aa8□□□□□ -1.13
CDRT1-207ENST00000583965 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
CDRT1-207ENST00000583965 TMEM243Q9BU79 118 aa8□□□□□ -1.13
CDRT1-207ENST00000583965 LYSTQ99698 3801 aa8□□□□□ -1.13
CDRT1-207ENST00000583965 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
CDRT1-207ENST00000583965 ORMDL2Q53FV1 153 aa7.99□□□□□ -1.13
CDRT1-207ENST00000583965 HSPB8Q9UJY1 196 aa7.99□□□□□ -1.13
CDRT1-207ENST00000583965 VPS13DQ5THJ4 4388 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 LINC01549A6NIU2 74 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 H7C423 109 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 SIVA1O15304 175 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 G0S2P27469 103 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 PMCHL1Q16048 86 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 LINC00476Q8WZB0 136 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 CHCHD5Q9BSY4 110 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 CHCHD7Q9BUK0 85 aa7.98□□□□□ -1.13
CDRT1-207ENST00000583965 UBE2L6O14933 153 aa7.97□□□□□ -1.13
CDRT1-207ENST00000583965 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
CDRT1-207ENST00000583965 BTF3P20290 206 aaKnown RBP7.97□□□□□ -1.13
CDRT1-207ENST00000583965 SMAGPQ0VAQ4 97 aa7.97□□□□□ -1.13
CDRT1-207ENST00000583965 WFDC10BQ8IUB3 73 aa7.97□□□□□ -1.13
CDRT1-207ENST00000583965 DEFB104AQ8WTQ1 72 aa7.97□□□□□ -1.13
CDRT1-207ENST00000583965 ALMS1Q8TCU4 4167 aa7.97□□□□□ -1.13
CDRT1-207ENST00000583965 K7EP13 123 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 LY6G6CO95867 125 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 DNAH10OSP0CZ25 163 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 LINC01556Q5JQF7 62 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 Q8N976 141 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 C12orf57Q99622 126 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 Q9H8V8 135 aa7.96□□□□□ -1.14
CDRT1-207ENST00000583965 DNAH1Q9P2D7 4330 aa7.95□□□□□ -1.14
CDRT1-207ENST00000583965 A0A087WX48 190 aa7.95□□□□□ -1.14
CDRT1-207ENST00000583965 PET117Q6UWS5 81 aa7.95□□□□□ -1.14
CDRT1-207ENST00000583965 TOMM6Q96B49 74 aa7.95□□□□□ -1.14
CDRT1-207ENST00000583965 MAP1LC3CQ9BXW4 147 aa7.95□□□□□ -1.14
CDRT1-207ENST00000583965 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
CDRT1-207ENST00000583965 A0A1B0GUV1 79 aa7.94□□□□□ -1.14
CDRT1-207ENST00000583965 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
CDRT1-207ENST00000583965 TMEM262E9PQX1 116 aa7.94□□□□□ -1.14
CDRT1-207ENST00000583965 SYS1-DBNDD2H3BUS1 97 aa7.94□□□□□ -1.14
CDRT1-207ENST00000583965 ATP5LO75964 103 aa7.94□□□□□ -1.14
CDRT1-207ENST00000583965 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
CDRT1-207ENST00000583965 KRTDAPP60985 99 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms