RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 COTL1Q14019 142 aa10.27□□□□□ -0.76
SENP3-208ENST00000583277 PMCHL1Q16048 86 aa10.27□□□□□ -0.76
SENP3-208ENST00000583277 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
SENP3-208ENST00000583277 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
SENP3-208ENST00000583277 TSHBP01222 138 aa10.26□□□□□ -0.77
SENP3-208ENST00000583277 LINC01549A6NIU2 74 aa10.26□□□□□ -0.77
SENP3-208ENST00000583277 H3BNG1 76 aa10.26□□□□□ -0.77
SENP3-208ENST00000583277 PHLDA1Q8WV24 401 aaPredicted RBP10.26□□□□□ -0.77
SENP3-208ENST00000583277 VSIG2Q96IQ7 327 aa10.26□□□□□ -0.77
SENP3-208ENST00000583277 A0A096LNJ9 63 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 DEFB131BA0A096LNP1 70 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 A0A0J9YY99 117 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 LOC105371267A0A1B0GV96 52 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 BTF3P20290 206 aaKnown RBP10.25□□□□□ -0.77
SENP3-208ENST00000583277 TMEM97Q5BJF2 176 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 HSPB8Q9UJY1 196 aa10.25□□□□□ -0.77
SENP3-208ENST00000583277 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
SENP3-208ENST00000583277 LEPROTL1O95214 131 aa10.24□□□□□ -0.77
SENP3-208ENST00000583277 GTSF1LQ9H1H1 148 aa10.24□□□□□ -0.77
SENP3-208ENST00000583277 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
SENP3-208ENST00000583277 MRPL23Q16540 153 aaKnown RBP10.23□□□□□ -0.77
SENP3-208ENST00000583277 ATP6V0E2Q8NHE4 81 aa10.23□□□□□ -0.77
SENP3-208ENST00000583277 CYSLTR1Q9Y271 337 aa10.23□□□□□ -0.77
SENP3-208ENST00000583277 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
SENP3-208ENST00000583277 C2orf66Q6UXQ4 117 aa10.22□□□□□ -0.77
SENP3-208ENST00000583277 C20orf203Q8NBC4 194 aa10.22□□□□□ -0.77
SENP3-208ENST00000583277 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
SENP3-208ENST00000583277 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
SENP3-208ENST00000583277 ATP5LO75964 103 aa10.2□□□□□ -0.78
SENP3-208ENST00000583277 AKR1D1P51857 326 aa10.2□□□□□ -0.78
SENP3-208ENST00000583277 CHCHD7Q9BUK0 85 aa10.2□□□□□ -0.78
SENP3-208ENST00000583277 TRBV25-1A0A075B6N4 114 aa10.19□□□□□ -0.78
SENP3-208ENST00000583277 A0A096LPF7 62 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 SMAGPQ0VAQ4 97 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 IFI27L1Q96BM0 104 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 MAP1LC3CQ9BXW4 147 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 RPL39P62891 51 aaKnown RBP10.18□□□□□ -0.78
SENP3-208ENST00000583277 ERASQ7Z444 233 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
SENP3-208ENST00000583277 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.17□□□□□ -0.78
SENP3-208ENST00000583277 H7C423 109 aa10.17□□□□□ -0.78
SENP3-208ENST00000583277 KRTDAPP60985 99 aa10.17□□□□□ -0.78
SENP3-208ENST00000583277 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
SENP3-208ENST00000583277 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
SENP3-208ENST00000583277 UBE2L6O14933 153 aa10.16□□□□□ -0.78
SENP3-208ENST00000583277 NPSP0C0P6 89 aa10.16□□□□□ -0.78
SENP3-208ENST00000583277 TIRAPP58753 221 aa10.16□□□□□ -0.78
SENP3-208ENST00000583277 SPANXA1Q9NS26 97 aa10.16□□□□□ -0.78
SENP3-208ENST00000583277 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
SENP3-208ENST00000583277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.15□□□□□ -0.78
SENP3-208ENST00000583277 IGKV2-29A2NJV5 120 aaPredicted RBP10.15□□□□□ -0.78
SENP3-208ENST00000583277 IGIPA6NJ69 53 aa10.15□□□□□ -0.78
SENP3-208ENST00000583277 C3orf79P0CE67 100 aa10.15□□□□□ -0.78
SENP3-208ENST00000583277 TIMM21Q9BVV7 248 aa10.15□□□□□ -0.78
SENP3-208ENST00000583277 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 Q6ZN92 141 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 C20orf202A1L168 122 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 PAPPA-AS1Q5QFB9 102 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 LELP1Q5T871 98 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 PET117Q6UWS5 81 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 SPATA12Q7Z6I5 190 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 MRPL52Q86TS9 123 aaKnown RBP10.14□□□□□ -0.79
SENP3-208ENST00000583277 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 UBE2D4Q9Y2X8 147 aa10.14□□□□□ -0.79
SENP3-208ENST00000583277 ZNF25P17030 456 aaPredicted RBP10.13□□□□□ -0.79
SENP3-208ENST00000583277 PKIAP61925 76 aa10.13□□□□□ -0.79
SENP3-208ENST00000583277 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
SENP3-208ENST00000583277 PRSS1P07477 247 aa10.12□□□□□ -0.79
SENP3-208ENST00000583277 FGF6P10767 208 aa10.12□□□□□ -0.79
SENP3-208ENST00000583277 JOSD1Q15040 202 aaPredicted RBP10.12□□□□□ -0.79
SENP3-208ENST00000583277 AMMECR1LQ6DCA0 310 aa10.12□□□□□ -0.79
SENP3-208ENST00000583277 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 H0Y8G0 127 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
SENP3-208ENST00000583277 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 LYPD5Q6UWN5 251 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
SENP3-208ENST00000583277 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
SENP3-208ENST00000583277 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
SENP3-208ENST00000583277 IGLL5B9A064 214 aa10.1□□□□□ -0.79
SENP3-208ENST00000583277 SCGB1D1O95968 90 aa10.1□□□□□ -0.79
SENP3-208ENST00000583277 OR5A1Q8NGJ0 315 aa10.1□□□□□ -0.79
SENP3-208ENST00000583277 TRAV8-6A0A0B4J262 113 aa10.09□□□□□ -0.79
SENP3-208ENST00000583277 GAGE6Q13070 117 aa10.09□□□□□ -0.79
SENP3-208ENST00000583277 PMVKQ15126 192 aa10.09□□□□□ -0.79
SENP3-208ENST00000583277 PYY3Q5JQD4 70 aa10.09□□□□□ -0.79
SENP3-208ENST00000583277 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
SENP3-208ENST00000583277 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
SENP3-208ENST00000583277 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
SENP3-208ENST00000583277 VCX2Q9H322 139 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms