RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 A0A0J9YY99 117 aa16.36■□□□□ 0.21
RARA-AS1-201ENST00000581080 HBDP02042 147 aa16.36■□□□□ 0.21
RARA-AS1-201ENST00000581080 LINC00694P0DN24 101 aa16.36■□□□□ 0.21
RARA-AS1-201ENST00000581080 NUDT3O95989 172 aa16.36■□□□□ 0.21
RARA-AS1-201ENST00000581080 BTF3P20290 206 aaKnown RBP16.34■□□□□ 0.21
RARA-AS1-201ENST00000581080 COL7A1Q02388 2944 aa16.33■□□□□ 0.21
RARA-AS1-201ENST00000581080 COTL1Q14019 142 aa16.33■□□□□ 0.21
RARA-AS1-201ENST00000581080 LEPROTL1O95214 131 aa16.33■□□□□ 0.2
RARA-AS1-201ENST00000581080 DEFB131BA0A096LNP1 70 aa16.32■□□□□ 0.2
RARA-AS1-201ENST00000581080 G0S2P27469 103 aa16.32■□□□□ 0.2
RARA-AS1-201ENST00000581080 DNAH9Q9NYC9 4486 aa16.32■□□□□ 0.2
RARA-AS1-201ENST00000581080 OR10D4PQ8NGN7 298 aa16.31■□□□□ 0.2
RARA-AS1-201ENST00000581080 H3BNG1 76 aa16.3■□□□□ 0.2
RARA-AS1-201ENST00000581080 C2orf66Q6UXQ4 117 aa16.3■□□□□ 0.2
RARA-AS1-201ENST00000581080 ATP6V0E2Q8NHE4 81 aa16.3■□□□□ 0.2
RARA-AS1-201ENST00000581080 NTM-AS1Q6ZSK4 140 aa16.29■□□□□ 0.2
RARA-AS1-201ENST00000581080 TOMM6Q96B49 74 aa16.29■□□□□ 0.2
RARA-AS1-201ENST00000581080 GTSF1LQ9H1H1 148 aa16.29■□□□□ 0.2
RARA-AS1-201ENST00000581080 HSPB8Q9UJY1 196 aa16.29■□□□□ 0.2
RARA-AS1-201ENST00000581080 MRPL23Q16540 153 aaKnown RBP16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 C20orf203Q8NBC4 194 aa16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 CHCHD7Q9BUK0 85 aa16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 TRAV10A0A0B4J240 114 aa16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 AKR1D1P51857 326 aa16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 LINC00173Q6ZV60 143 aa16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 CYSLTR1Q9Y271 337 aa16.28■□□□□ 0.2
RARA-AS1-201ENST00000581080 ICOSQ9Y6W8 199 aa16.27■□□□□ 0.2
RARA-AS1-201ENST00000581080 STAB2Q8WWQ8 2551 aa16.26■□□□□ 0.19
RARA-AS1-201ENST00000581080 RPL39P62891 51 aaKnown RBP16.26■□□□□ 0.19
RARA-AS1-201ENST00000581080 PRKDCP78527 4128 aaKnown RBP16.26■□□□□ 0.19
RARA-AS1-201ENST00000581080 A0A096LPF7 62 aa16.26■□□□□ 0.19
RARA-AS1-201ENST00000581080 LINC01549A6NIU2 74 aa16.26■□□□□ 0.19
RARA-AS1-201ENST00000581080 SH2D6Q7Z4S9 175 aa16.25■□□□□ 0.19
RARA-AS1-201ENST00000581080 TMEM97Q5BJF2 176 aa16.24■□□□□ 0.19
RARA-AS1-201ENST00000581080 TRBV6-8A0A0A6YYG3 113 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 SCGB3A1Q96QR1 104 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 ATP5LO75964 103 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 C3orf79P0CE67 100 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 KRTDAPP60985 99 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 ERASQ7Z444 233 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 IFI27L1Q96BM0 104 aa16.23■□□□□ 0.19
RARA-AS1-201ENST00000581080 TRBV25-1A0A075B6N4 114 aa16.22■□□□□ 0.19
RARA-AS1-201ENST00000581080 IGIPA6NJ69 53 aa16.21■□□□□ 0.19
RARA-AS1-201ENST00000581080 MAP1LC3CQ9BXW4 147 aa16.21■□□□□ 0.19
RARA-AS1-201ENST00000581080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.21■□□□□ 0.18
RARA-AS1-201ENST00000581080 IGKV2-29A2NJV5 120 aaPredicted RBP16.21■□□□□ 0.18
RARA-AS1-201ENST00000581080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.2■□□□□ 0.18
RARA-AS1-201ENST00000581080 TMEM243Q9BU79 118 aa16.2■□□□□ 0.18
RARA-AS1-201ENST00000581080 TIMM17AQ99595 171 aa16.19■□□□□ 0.18
RARA-AS1-201ENST00000581080 SYS1-DBNDD2H3BUS1 97 aa16.18■□□□□ 0.18
RARA-AS1-201ENST00000581080 UBE2D4Q9Y2X8 147 aa16.18■□□□□ 0.18
RARA-AS1-201ENST00000581080 PYGO1Q9Y3Y4 419 aa16.18■□□□□ 0.18
RARA-AS1-201ENST00000581080 TMEM141Q96I45 108 aa16.17■□□□□ 0.18
RARA-AS1-201ENST00000581080 FBN3Q75N90 2809 aa16.16■□□□□ 0.18
RARA-AS1-201ENST00000581080 H7C423 109 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 JOSD1Q15040 202 aaPredicted RBP16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 PYY3Q5JQD4 70 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 SPATA12Q7Z6I5 190 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 H0Y8G0 127 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 UBE2L6O14933 153 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 PRSS1P07477 247 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 CEMP1Q6PRD7 247 aaPredicted RBP16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 LYPD5Q6UWN5 251 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 Q6ZN92 141 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 C15orf53Q8NAA6 179 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 SPANXA1Q9NS26 97 aa16.15■□□□□ 0.18
RARA-AS1-201ENST00000581080 PET117Q6UWS5 81 aa16.14■□□□□ 0.17
RARA-AS1-201ENST00000581080 CHCHD5Q9BSY4 110 aa16.14■□□□□ 0.17
RARA-AS1-201ENST00000581080 TIMM21Q9BVV7 248 aa16.14■□□□□ 0.17
RARA-AS1-201ENST00000581080 FGF6P10767 208 aa16.13■□□□□ 0.17
RARA-AS1-201ENST00000581080 MRPL52Q86TS9 123 aaKnown RBP16.13■□□□□ 0.17
RARA-AS1-201ENST00000581080 TIRAPP58753 221 aa16.13■□□□□ 0.17
RARA-AS1-201ENST00000581080 BAALCQ8WXS3 180 aa16.13■□□□□ 0.17
RARA-AS1-201ENST00000581080 OPRPNQ99935 248 aaPredicted RBP16.13■□□□□ 0.17
RARA-AS1-201ENST00000581080 CSDC2Q9Y534 153 aaKnown RBP16.13■□□□□ 0.17
RARA-AS1-201ENST00000581080 IGLL5B9A064 214 aa16.12■□□□□ 0.17
RARA-AS1-201ENST00000581080 SCGB1D1O95968 90 aa16.12■□□□□ 0.17
RARA-AS1-201ENST00000581080 NPSP0C0P6 89 aa16.12■□□□□ 0.17
RARA-AS1-201ENST00000581080 LELP1Q5T871 98 aa16.12■□□□□ 0.17
RARA-AS1-201ENST00000581080 Q8N976 141 aa16.12■□□□□ 0.17
RARA-AS1-201ENST00000581080 FAM104AQ969W3 186 aa16.12■□□□□ 0.17
RARA-AS1-201ENST00000581080 IGLV4-3A0A075B6K6 122 aa16.11■□□□□ 0.17
RARA-AS1-201ENST00000581080 SMAGPQ0VAQ4 97 aa16.1■□□□□ 0.17
RARA-AS1-201ENST00000581080 GAGE6Q13070 117 aa16.1■□□□□ 0.17
RARA-AS1-201ENST00000581080 AMMECR1LQ6DCA0 310 aa16.1■□□□□ 0.17
RARA-AS1-201ENST00000581080 DGAT2L7PQ6IED9 249 aa16.1■□□□□ 0.17
RARA-AS1-201ENST00000581080 PAPPA-AS1Q5QFB9 102 aa16.09■□□□□ 0.17
RARA-AS1-201ENST00000581080 LINC01545Q5VT33 79 aa16.09■□□□□ 0.17
RARA-AS1-201ENST00000581080 TRAV12-1A0A0B4J245 112 aa16.08■□□□□ 0.17
RARA-AS1-201ENST00000581080 ESRGQ1W209 222 aa16.08■□□□□ 0.17
RARA-AS1-201ENST00000581080 ZNF25P17030 456 aaPredicted RBP16.08■□□□□ 0.16
RARA-AS1-201ENST00000581080 MRPS36P82909 103 aaKnown RBP16.08■□□□□ 0.16
RARA-AS1-201ENST00000581080 PMVKQ15126 192 aa16.08■□□□□ 0.16
RARA-AS1-201ENST00000581080 LGALS9CQ6DKI2 356 aa16.08■□□□□ 0.16
RARA-AS1-201ENST00000581080 VCX2Q9H322 139 aa16.08■□□□□ 0.16
RARA-AS1-201ENST00000581080 C20orf202A1L168 122 aa16.07■□□□□ 0.16
RARA-AS1-201ENST00000581080 SMIM6P0DI80 62 aa16.07■□□□□ 0.16
RARA-AS1-201ENST00000581080 ODF1Q14990 250 aa16.07■□□□□ 0.16
RARA-AS1-201ENST00000581080 A0A087WX48 190 aa16.06■□□□□ 0.16
RARA-AS1-201ENST00000581080 PRSS29PA6NIE9 313 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms