RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NCR2O95944 276 aa13.24□□□□□ -0.29
SMG8-204ENST00000580498 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
SMG8-204ENST00000580498 TSKUQ8WUA8 353 aa13.24□□□□□ -0.29
SMG8-204ENST00000580498 SMR3BP02814 79 aaPredicted RBP13.23□□□□□ -0.29
SMG8-204ENST00000580498 SRP19P09132 144 aaKnown RBP13.23□□□□□ -0.29
SMG8-204ENST00000580498 INAFM2P0DMQ5 153 aa13.23□□□□□ -0.29
SMG8-204ENST00000580498 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
SMG8-204ENST00000580498 PEA15Q15121 130 aa13.23□□□□□ -0.29
SMG8-204ENST00000580498 GATD1Q8NB37 220 aa13.23□□□□□ -0.29
SMG8-204ENST00000580498 APOBP04114 4563 aaKnown RBP13.22□□□□□ -0.29
SMG8-204ENST00000580498 TRAV26-2A0A0B4J265 109 aa13.22□□□□□ -0.29
SMG8-204ENST00000580498 A0A1B0GVG6 124 aa13.22□□□□□ -0.29
SMG8-204ENST00000580498 HIGD1CA8MV81 97 aa13.22□□□□□ -0.29
SMG8-204ENST00000580498 APCSP02743 223 aa13.22□□□□□ -0.29
SMG8-204ENST00000580498 TMEM241Q24JQ0 296 aa13.22□□□□□ -0.29
SMG8-204ENST00000580498 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
SMG8-204ENST00000580498 RIGQ13278 110 aa13.21□□□□□ -0.29
SMG8-204ENST00000580498 SMDT1Q9H4I9 107 aa13.21□□□□□ -0.29
SMG8-204ENST00000580498 CLRN3Q8NCR9 226 aa13.2□□□□□ -0.3
SMG8-204ENST00000580498 SDHAF1A6NFY7 115 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 H7C423 109 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 PLA2G1BP04054 148 aaKnown RBP13.19□□□□□ -0.3
SMG8-204ENST00000580498 PMCHP20382 165 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 HAMPP81172 84 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 TMEM191AQ9H0A3 160 aa13.19□□□□□ -0.3
SMG8-204ENST00000580498 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 I3L3M4 83 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 PPP1R17O96001 155 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 ADIRFQ15847 76 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 RPL39LQ96EH5 51 aaKnown RBP13.18□□□□□ -0.3
SMG8-204ENST00000580498 BTF3L4Q96K17 158 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 ST20Q9HBF5 79 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 AP5S1Q9NUS5 200 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 FAM30AQ9NZY2 134 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 NAT8Q9UHE5 227 aa13.18□□□□□ -0.3
SMG8-204ENST00000580498 RNASEKQ6P5S7 137 aaKnown RBP13.17□□□□□ -0.3
SMG8-204ENST00000580498 Q6ZSA8 131 aa13.17□□□□□ -0.3
SMG8-204ENST00000580498 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
SMG8-204ENST00000580498 TMEM101Q96IK0 257 aa13.17□□□□□ -0.3
SMG8-204ENST00000580498 NAT8BQ9UHF3 227 aa13.17□□□□□ -0.3
SMG8-204ENST00000580498 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
SMG8-204ENST00000580498 ISOC2Q96AB3 205 aa13.16□□□□□ -0.3
SMG8-204ENST00000580498 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
SMG8-204ENST00000580498 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
SMG8-204ENST00000580498 ZNF25P17030 456 aaPredicted RBP13.15□□□□□ -0.3
SMG8-204ENST00000580498 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
SMG8-204ENST00000580498 LINC01620Q4KN68 170 aa13.15□□□□□ -0.3
SMG8-204ENST00000580498 CFAP161Q6P656 301 aa13.15□□□□□ -0.3
SMG8-204ENST00000580498 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.14□□□□□ -0.31
SMG8-204ENST00000580498 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
SMG8-204ENST00000580498 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
SMG8-204ENST00000580498 RPL23P62829 140 aaKnown RBP13.13□□□□□ -0.31
SMG8-204ENST00000580498 CHAC1Q9BUX1 264 aa13.13□□□□□ -0.31
SMG8-204ENST00000580498 V9GYV3 84 aa13.13□□□□□ -0.31
SMG8-204ENST00000580498 PRSS1P07477 247 aa13.12□□□□□ -0.31
SMG8-204ENST00000580498 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
SMG8-204ENST00000580498 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
SMG8-204ENST00000580498 A0A1B0GW15 77 aa13.11□□□□□ -0.31
SMG8-204ENST00000580498 S100A8P05109 93 aa13.11□□□□□ -0.31
SMG8-204ENST00000580498 FGF6P10767 208 aa13.11□□□□□ -0.31
SMG8-204ENST00000580498 SCXQ7RTU7 201 aa13.11□□□□□ -0.31
SMG8-204ENST00000580498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.1□□□□□ -0.31
SMG8-204ENST00000580498 IGKV2-29A2NJV5 120 aaPredicted RBP13.1□□□□□ -0.31
SMG8-204ENST00000580498 RAB4AP20338 218 aa13.1□□□□□ -0.31
SMG8-204ENST00000580498 FCER1GP30273 86 aa13.1□□□□□ -0.31
SMG8-204ENST00000580498 RAB14P61106 215 aa13.1□□□□□ -0.31
SMG8-204ENST00000580498 AMN1Q8IY45 258 aa13.1□□□□□ -0.31
SMG8-204ENST00000580498 ABCA13Q86UQ4 5058 aa13.1□□□□□ -0.31
SMG8-204ENST00000580498 PPP1R2P9O14990 202 aa13.09□□□□□ -0.31
SMG8-204ENST00000580498 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
SMG8-204ENST00000580498 C9orf163Q8N9P6 203 aa13.09□□□□□ -0.31
SMG8-204ENST00000580498 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
SMG8-204ENST00000580498 KIR2DL4Q99706 377 aa13.09□□□□□ -0.31
SMG8-204ENST00000580498 VCYO14598 125 aa13.08□□□□□ -0.32
SMG8-204ENST00000580498 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
SMG8-204ENST00000580498 C7orf77A4D0Y5 90 aa13.07□□□□□ -0.32
SMG8-204ENST00000580498 GAGE12HA6NDE8 117 aa13.07□□□□□ -0.32
SMG8-204ENST00000580498 TRBV27A0A0K0K1C4 114 aa13.06□□□□□ -0.32
SMG8-204ENST00000580498 F8W036 122 aa13.06□□□□□ -0.32
SMG8-204ENST00000580498 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
SMG8-204ENST00000580498 TMEM18Q96B42 140 aa13.06□□□□□ -0.32
SMG8-204ENST00000580498 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
SMG8-204ENST00000580498 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 SMIM27A0A1W2PRY6 76 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 LINC00862A6NCI5 91 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 TCAPO15273 167 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 CAMPP49913 170 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 SS18Q15532 418 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 CIRBP-AS1Q8TBR5 109 aa13.05□□□□□ -0.32
SMG8-204ENST00000580498 CHCHD10Q8WYQ3 142 aaPredicted RBP13.05□□□□□ -0.32
SMG8-204ENST00000580498 C9JQL5 133 aa13.04□□□□□ -0.32
SMG8-204ENST00000580498 TSHBP01222 138 aa13.04□□□□□ -0.32
SMG8-204ENST00000580498 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
SMG8-204ENST00000580498 SUMO2P61956 95 aaKnown RBP13.04□□□□□ -0.32
SMG8-204ENST00000580498 DPH3Q96FX2 82 aa13.04□□□□□ -0.32
SMG8-204ENST00000580498 ESDP10768 282 aa13.03□□□□□ -0.32
SMG8-204ENST00000580498 CKS2P33552 79 aa13.03□□□□□ -0.32
SMG8-204ENST00000580498 FAM104BQ5XKR9 115 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms