RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TM2D2Q9BX73 214 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SPANXB1Q9NS25 103 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 ATP5LO75964 103 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SCGB1A1P11684 91 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 WFDC2Q14508 124 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 MDFIQ99750 246 aa9.25□□□□□ -0.93
CDK5RAP3-217ENST00000580287 IGHV3OR16-12A0A075B7B8 117 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 E9PLD3 99 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 WFDC9Q8NEX5 89 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 IGLL5B9A064 214 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 ZNF56Q15929 161 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 MAPKAPK5-AS1Q8N8E1 139 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
CDK5RAP3-217ENST00000580287 DPM2O94777 84 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 EMP1P54849 157 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 ORMDL2Q53FV1 153 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 NXPH4O95158 308 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 MALP21145 153 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 TRPT1Q86TN4 253 aaKnown RBP9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SYT8Q8NBV8 401 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
CDK5RAP3-217ENST00000580287 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 A8MTW9 85 aa9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 F8W1H4 67 aa9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 ZNF876PQ49A33 203 aa9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 NBEAL1Q6ZS30 2694 aa9.22□□□□□ -0.93
CDK5RAP3-217ENST00000580287 PPP1R17O96001 155 aa9.21□□□□□ -0.93
CDK5RAP3-217ENST00000580287 INSL3P51460 131 aa9.21□□□□□ -0.93
CDK5RAP3-217ENST00000580287 LINC00315P59091 139 aa9.21□□□□□ -0.93
CDK5RAP3-217ENST00000580287 C9orf85Q96MD7 179 aa9.21□□□□□ -0.93
CDK5RAP3-217ENST00000580287 H3BMG7 143 aa9.21□□□□□ -0.94
CDK5RAP3-217ENST00000580287 C2orf66Q6UXQ4 117 aa9.21□□□□□ -0.94
CDK5RAP3-217ENST00000580287 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.94
CDK5RAP3-217ENST00000580287 CDIP1Q9H305 208 aa9.21□□□□□ -0.94
CDK5RAP3-217ENST00000580287 C12orf74Q32Q52 190 aa9.2□□□□□ -0.94
CDK5RAP3-217ENST00000580287 CMYA5Q8N3K9 4069 aa9.2□□□□□ -0.94
CDK5RAP3-217ENST00000580287 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
CDK5RAP3-217ENST00000580287 LINC01587Q99440 93 aa9.2□□□□□ -0.94
CDK5RAP3-217ENST00000580287 SPATA25Q9BR10 227 aa9.2□□□□□ -0.94
CDK5RAP3-217ENST00000580287 ANK2Q01484 3957 aa9.2□□□□□ -0.94
CDK5RAP3-217ENST00000580287 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 SDHAF1A6NFY7 115 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 J3QR89 54 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 C1orf158Q8N1D5 194 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 MTURNQ8N3F0 131 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 TOMM6Q96B49 74 aa9.19□□□□□ -0.94
CDK5RAP3-217ENST00000580287 RPL39P62891 51 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 TAL2Q16559 108 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 KIR2DL4Q99706 377 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 A0A087WX48 190 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 KRTAP10-11P60412 298 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 PRO0461Q9UI25 63 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 RRN3P1Q2M238 152 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 C5orf47Q569G3 176 aa9.18□□□□□ -0.94
CDK5RAP3-217ENST00000580287 A0A1B0GV72 72 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 CRYGDP07320 174 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 POM121L12Q8N7R1 296 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 HIST1H4GQ99525 98 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 TP53TG1Q9Y2A0 90 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 VCYO14598 125 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 INSP01308 110 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 CYSLTR1Q9Y271 337 aa9.17□□□□□ -0.94
CDK5RAP3-217ENST00000580287 TRBV7-3A0A075B6L6 115 aa9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 H7C1H1 209 aa9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 CRYBA4P53673 196 aa9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 CMC4P56277 68 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 BAALCQ8WXS3 180 aa9.16□□□□□ -0.94
CDK5RAP3-217ENST00000580287 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
CDK5RAP3-217ENST00000580287 F8VRH5 84 aa9.15□□□□□ -0.94
CDK5RAP3-217ENST00000580287 M0QY20 66 aa9.15□□□□□ -0.94
CDK5RAP3-217ENST00000580287 PLNP26678 52 aa9.15□□□□□ -0.94
CDK5RAP3-217ENST00000580287 OPRPNQ99935 248 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-217ENST00000580287 PRB2P02812 416 aaPredicted RBP9.15□□□□□ -0.95
CDK5RAP3-217ENST00000580287 A0A1B0GWB2 263 aa9.14□□□□□ -0.95
CDK5RAP3-217ENST00000580287 TSHBP01222 138 aa9.14□□□□□ -0.95
CDK5RAP3-217ENST00000580287 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
CDK5RAP3-217ENST00000580287 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
CDK5RAP3-217ENST00000580287 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
CDK5RAP3-217ENST00000580287 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
CDK5RAP3-217ENST00000580287 P0DMU3 169 aa9.13□□□□□ -0.95
CDK5RAP3-217ENST00000580287 FAM231AP0DMU4 169 aa9.13□□□□□ -0.95
CDK5RAP3-217ENST00000580287 FAM231CP0DMU5 169 aa9.13□□□□□ -0.95
CDK5RAP3-217ENST00000580287 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
CDK5RAP3-217ENST00000580287 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
CDK5RAP3-217ENST00000580287 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
CDK5RAP3-217ENST00000580287 IGHV4-30-4P0DP06 118 aa9.12□□□□□ -0.95
CDK5RAP3-217ENST00000580287 CKS1BP61024 79 aa9.12□□□□□ -0.95
CDK5RAP3-217ENST00000580287 SFTA2Q6UW10 78 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms