RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TRBV7-3A0A075B6L6 115 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 SRSF9Q13242 221 aaKnown RBP eCLIP7.72□□□□□ -1.17
TOP3A-209ENST00000580095 CEMP1Q6PRD7 247 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-209ENST00000580095 SETXQ7Z333 2677 aaKnown RBP7.72□□□□□ -1.17
TOP3A-209ENST00000580095 E9PLD3 99 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 Q6YL49 198 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 PPP1R17O96001 155 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 TMEM61Q8N0U2 210 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 POM121L12Q8N7R1 296 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 Q96MF0 132 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 CITED2Q99967 270 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-209ENST00000580095 ZNF580Q9UK33 172 aa7.72□□□□□ -1.17
TOP3A-209ENST00000580095 A0A1W2PRX2 142 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 RBMY1BA6NDE4 496 aaKnown RBP7.71□□□□□ -1.18
TOP3A-209ENST00000580095 RBMY1EA6NEQ0 496 aaKnown RBP7.71□□□□□ -1.18
TOP3A-209ENST00000580095 RBMY1DP0C7P1 496 aaKnown RBP7.71□□□□□ -1.18
TOP3A-209ENST00000580095 FOXI1Q12951 378 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 PMVKQ15126 192 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 ZFAND6Q6FIF0 208 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 LGALS9O00182 355 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 APOMO95445 188 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 UBE2E2Q96LR5 201 aa7.71□□□□□ -1.18
TOP3A-209ENST00000580095 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
TOP3A-209ENST00000580095 KMT2BQ9UMN6 2715 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-209ENST00000580095 TRBV20-1A0A075B6N2 111 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 ELANEP08246 267 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 NDUFV3P56181 108 aaKnown RBP7.69□□□□□ -1.18
TOP3A-209ENST00000580095 Q6ZSN1 163 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 NFE4Q86UQ8 179 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 TEX29Q8N6K0 151 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 DLX4Q92988 240 aaPredicted RBP7.69□□□□□ -1.18
TOP3A-209ENST00000580095 CR1P17927 2039 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 IGHV3OR16-12A0A075B7B8 117 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 ADARB2-AS1A8MUL3 147 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 J3QLI3 93 aa7.69□□□□□ -1.18
TOP3A-209ENST00000580095 LINC01549A6NIU2 74 aa7.68□□□□□ -1.18
TOP3A-209ENST00000580095 IGHV3-38A0A0C4DH36 116 aa7.68□□□□□ -1.18
TOP3A-209ENST00000580095 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
TOP3A-209ENST00000580095 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
TOP3A-209ENST00000580095 GAGE13Q4V321 117 aa7.68□□□□□ -1.18
TOP3A-209ENST00000580095 HELZ2Q9BYK8 2649 aaKnown RBP7.67□□□□□ -1.18
TOP3A-209ENST00000580095 LOC107984156A0A0G2JMH3 177 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 H3BMM0 161 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 RHODO00212 210 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 FSHBP01225 129 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 ARL17AQ8IVW1 177 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 A0A0J9YY99 117 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 TAL2Q16559 108 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 DEFB113Q30KQ7 82 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 TRPT1Q86TN4 253 aaKnown RBP7.67□□□□□ -1.18
TOP3A-209ENST00000580095 ODF3Q96PU9 254 aa7.67□□□□□ -1.18
TOP3A-209ENST00000580095 TRBV6-5A0A0K0K1A5 114 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 TIMM17AQ99595 171 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 XCL2Q9UBD3 114 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 TMEM89A2RUT3 159 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 LINC01619G3V211 115 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 CD28P10747 220 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
TOP3A-209ENST00000580095 HERVK_113P61574 105 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 C20orf203Q8NBC4 194 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 WFDC11Q8NEX6 87 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 DYNLRB2Q8TF09 96 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 TMEM141Q96I45 108 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 NBEAL2Q6ZNJ1 2754 aa7.66□□□□□ -1.18
TOP3A-209ENST00000580095 FN1P02751 2386 aaKnown RBP7.66□□□□□ -1.18
TOP3A-209ENST00000580095 I3L3M4 83 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 J3QQQ9 107 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 LINC01587Q99440 93 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 TRGV11A0A075B6L2 103 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 A8MZ25 164 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 H7C2G1 150 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 C3orf56Q8N813 242 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
TOP3A-209ENST00000580095 IGLV4-3A0A075B6K6 122 aa7.65□□□□□ -1.19
TOP3A-209ENST00000580095 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.19
TOP3A-209ENST00000580095 LOC107984640A0A0U1RRK4 108 aa7.65□□□□□ -1.19
TOP3A-209ENST00000580095 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.19
TOP3A-209ENST00000580095 MAP6D1Q9H9H5 199 aa7.65□□□□□ -1.19
TOP3A-209ENST00000580095 LGALS3P17931 250 aaKnown RBP7.64□□□□□ -1.19
TOP3A-209ENST00000580095 AMELXQ99217 191 aa7.64□□□□□ -1.19
TOP3A-209ENST00000580095 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
TOP3A-209ENST00000580095 PSMB2P49721 201 aa7.64□□□□□ -1.19
TOP3A-209ENST00000580095 MEIG1Q5JSS6 88 aa7.64□□□□□ -1.19
TOP3A-209ENST00000580095 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
TOP3A-209ENST00000580095 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
TOP3A-209ENST00000580095 NSUN5P1Q3KNT7 163 aa7.63□□□□□ -1.19
TOP3A-209ENST00000580095 FASNP49327 2511 aaKnown RBP7.63□□□□□ -1.19
TOP3A-209ENST00000580095 HECTD1Q9ULT8 2610 aa7.63□□□□□ -1.19
TOP3A-209ENST00000580095 TRAV2A0A0B4J234 112 aa7.63□□□□□ -1.19
TOP3A-209ENST00000580095 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-209ENST00000580095 FAM104AQ969W3 186 aa7.63□□□□□ -1.19
TOP3A-209ENST00000580095 HIVEP2P31629 2446 aa7.63□□□□□ -1.19
TOP3A-209ENST00000580095 IGHV3-53P01767 116 aa7.62□□□□□ -1.19
TOP3A-209ENST00000580095 DEFB114Q30KQ6 69 aa7.62□□□□□ -1.19
TOP3A-209ENST00000580095 RNF152Q8N8N0 203 aa7.62□□□□□ -1.19
TOP3A-209ENST00000580095 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
TOP3A-209ENST00000580095 CFC1P0CG37 223 aa7.62□□□□□ -1.19
TOP3A-209ENST00000580095 PLA2G2AP14555 144 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms