RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 MGPP08493 103 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 P0DMU3 169 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 FAM231AP0DMU4 169 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 FAM231CP0DMU5 169 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 HTN3P15516 51 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 RPS10P46783 165 aaKnown RBP4.94□□□□□ -1.62
RNF43-204ENST00000580014 POLR2KP53803 58 aaKnown RBP4.94□□□□□ -1.62
RNF43-204ENST00000580014 UBE2D3P61077 147 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 UBE2D2P62837 147 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 MRPL23Q16540 153 aaKnown RBP4.94□□□□□ -1.62
RNF43-204ENST00000580014 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 SH2D6Q7Z4S9 175 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 ORMDL3Q8N138 153 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 C15orf53Q8NAA6 179 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
RNF43-204ENST00000580014 C20orf78Q9BR46 151 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 APLNQ9ULZ1 77 aa4.94□□□□□ -1.62
RNF43-204ENST00000580014 TRBV7-3A0A075B6L6 115 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 TRBV27A0A0K0K1C4 114 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 LOC100131303A0A0U1RQF7 123 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 D6R8Y8 96 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 C3orf84H3BNL1 204 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 CKS2P33552 79 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 RPL36AP83881 106 aaKnown RBP4.93□□□□□ -1.62
RNF43-204ENST00000580014 RPL36ALQ969Q0 106 aaKnown RBP4.93□□□□□ -1.62
RNF43-204ENST00000580014 RPL39LQ96EH5 51 aaKnown RBP4.93□□□□□ -1.62
RNF43-204ENST00000580014 URB1-AS1Q96HZ7 61 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 PRELID3AQ96N28 172 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 ALKBH7Q9BT30 221 aaPredicted RBP4.93□□□□□ -1.62
RNF43-204ENST00000580014 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
RNF43-204ENST00000580014 TRAPPC1Q9Y5R8 145 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 TGP01266 2768 aa4.93□□□□□ -1.62
RNF43-204ENST00000580014 IGLV2-18A0A075B6J9 118 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 A0A0J9YY99 117 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 SDHAF1A6NFY7 115 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 SMKR1H3BMG3 65 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 NCR2O95944 276 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 NPYP01303 97 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 FABP9Q0Z7S8 132 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 OR10J3Q5JRS4 329 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 DAZ4Q86SG3 579 aaKnown RBP4.92□□□□□ -1.62
RNF43-204ENST00000580014 ZNRF2Q8NHG8 242 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 TMEM70Q9BUB7 260 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 DAZ3Q9NR90 486 aaKnown RBP4.92□□□□□ -1.62
RNF43-204ENST00000580014 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 TNFRSF18Q9Y5U5 241 aa4.92□□□□□ -1.62
RNF43-204ENST00000580014 IGLL5B9A064 214 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 TRGC2P03986 189 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 GAGE1Q13065 139 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 GAGE4Q13068 117 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 GAGE5Q13069 117 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 KIAA1644Q3SXP7 199 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 CASC10Q5T4H9 136 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 NEGR1Q7Z3B1 354 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 ATP6V0E2Q8NHE4 81 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 GTSF1LQ9H1H1 148 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
RNF43-204ENST00000580014 DYNC2H1Q8NCM8 4307 aaKnown RBP4.91□□□□□ -1.62
RNF43-204ENST00000580014 DNAH7Q8WXX0 4024 aa4.9□□□□□ -1.62
RNF43-204ENST00000580014 K7EMI3 77 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 SRIP30626 198 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 Q0VG73 95 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 ESRGQ1W209 222 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 LYPD5Q6UWN5 251 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 NTM-AS1Q6ZSK4 140 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.63
RNF43-204ENST00000580014 TRBV6-8A0A0A6YYG3 113 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 I3L3M4 83 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 TCAPO15273 167 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 TSHBP01222 138 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 ESDP10768 282 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 IQCJQ1A5X6 159 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 LELP1Q5T871 98 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 ZFAND6Q6FIF0 208 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 Q8N8P6 123 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 C18orf32Q8TCD1 76 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 UPK3BQ9BT76 320 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 MAP1LC3AQ9H492 121 aa4.89□□□□□ -1.63
RNF43-204ENST00000580014 NXT2Q9NPJ8 142 aaKnown RBP4.89□□□□□ -1.63
RNF43-204ENST00000580014 MRPS16Q9Y3D3 137 aaKnown RBP4.89□□□□□ -1.63
RNF43-204ENST00000580014 PMCHP20382 165 aa4.88□□□□□ -1.63
RNF43-204ENST00000580014 CHCHD7Q9BUK0 85 aa4.88□□□□□ -1.63
RNF43-204ENST00000580014 LINC00588Q9Y4M8 146 aa4.88□□□□□ -1.63
RNF43-204ENST00000580014 IGHV3-38A0A0C4DH36 116 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 H7C423 109 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BKO60814 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BJP06899 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BOP23527 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BBP33778 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 IFI27P40305 119 aaPredicted RBP4.87□□□□□ -1.63
RNF43-204ENST00000580014 AMTP48728 403 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BDP58876 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST1H2BCP62807 126 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 COTL1Q14019 142 aa4.87□□□□□ -1.63
RNF43-204ENST00000580014 HIST2H2BEQ16778 126 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms