RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
CDK5RAP3-216ENST00000579853 BORCS7-ASMTA0A0B4J1R7 106 aa7.55□□□□□ -1.2
CDK5RAP3-216ENST00000579853 AKR1C8PQ5T2L2 129 aa7.55□□□□□ -1.2
CDK5RAP3-216ENST00000579853 CST9LP1Q5W188 147 aa7.55□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MED28Q9H204 178 aa7.55□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MUC21A0A140T8X8 626 aa7.54□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MGPP08493 103 aa7.54□□□□□ -1.2
CDK5RAP3-216ENST00000579853 COTL1Q14019 142 aa7.54□□□□□ -1.2
CDK5RAP3-216ENST00000579853 RASL11AQ6T310 242 aa7.54□□□□□ -1.2
CDK5RAP3-216ENST00000579853 PSORS1C2Q9UIG4 136 aa7.54□□□□□ -1.2
CDK5RAP3-216ENST00000579853 FAT4Q6V0I7 4981 aa7.54□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MAP1LC3B2A6NCE7 125 aa7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 AMTP48728 403 aa7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 NKX2-5P52952 324 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 SSTP61278 116 aa7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 INO80EQ8NBZ0 244 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 CHCHD10Q8WYQ3 142 aaPredicted RBP7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MLST8Q9BVC4 326 aa7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 MAP1LC3BQ9GZQ8 125 aa7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
CDK5RAP3-216ENST00000579853 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
CDK5RAP3-216ENST00000579853 DEFA1P59665 94 aa7.52□□□□□ -1.21
CDK5RAP3-216ENST00000579853 DEFA3P59666 94 aa7.52□□□□□ -1.21
CDK5RAP3-216ENST00000579853 RPL7L1Q6DKI1 246 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-216ENST00000579853 SUMO4Q6EEV6 95 aa7.52□□□□□ -1.21
CDK5RAP3-216ENST00000579853 BAGE2Q86Y30 109 aa7.52□□□□□ -1.21
CDK5RAP3-216ENST00000579853 TRAV26-2A0A0B4J265 109 aa7.51□□□□□ -1.21
CDK5RAP3-216ENST00000579853 AMMECR1LQ6DCA0 310 aa7.51□□□□□ -1.21
CDK5RAP3-216ENST00000579853 CARD19Q96LW7 228 aa7.51□□□□□ -1.21
CDK5RAP3-216ENST00000579853 CACNG7P62955 275 aa7.5□□□□□ -1.21
CDK5RAP3-216ENST00000579853 IFITM3Q01628 133 aa7.5□□□□□ -1.21
CDK5RAP3-216ENST00000579853 H7C423 109 aa7.49□□□□□ -1.21
CDK5RAP3-216ENST00000579853 TRGC1P0CF51 173 aa7.49□□□□□ -1.21
CDK5RAP3-216ENST00000579853 RPS20P60866 119 aaKnown RBP7.49□□□□□ -1.21
CDK5RAP3-216ENST00000579853 FER1L6-AS1Q8NA97 138 aa7.49□□□□□ -1.21
CDK5RAP3-216ENST00000579853 TPPP3Q9BW30 176 aa7.49□□□□□ -1.21
CDK5RAP3-216ENST00000579853 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
CDK5RAP3-216ENST00000579853 F2Z2F3 143 aa7.48□□□□□ -1.21
CDK5RAP3-216ENST00000579853 PAGE4O60829 102 aa7.48□□□□□ -1.21
CDK5RAP3-216ENST00000579853 PFDN1O60925 122 aa7.48□□□□□ -1.21
CDK5RAP3-216ENST00000579853 MT-ND6P03923 174 aa7.48□□□□□ -1.21
CDK5RAP3-216ENST00000579853 FOXI1Q12951 378 aa7.48□□□□□ -1.21
CDK5RAP3-216ENST00000579853 XKRY2A2RUG3 117 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 ZNF561-AS1K7EIQ3 104 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 NCR2O95944 276 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 PTTG1IPP53801 180 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 RNASEKQ6P5S7 137 aaKnown RBP7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 ISOC2Q96AB3 205 aa7.47□□□□□ -1.21
CDK5RAP3-216ENST00000579853 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.22
CDK5RAP3-216ENST00000579853 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
CDK5RAP3-216ENST00000579853 ZNF25P17030 456 aaPredicted RBP7.46□□□□□ -1.22
CDK5RAP3-216ENST00000579853 TMUB2Q71RG4 321 aa7.46□□□□□ -1.22
CDK5RAP3-216ENST00000579853 OR5A1Q8NGJ0 315 aa7.46□□□□□ -1.22
CDK5RAP3-216ENST00000579853 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
CDK5RAP3-216ENST00000579853 NTF3P20783 257 aa7.45□□□□□ -1.22
CDK5RAP3-216ENST00000579853 XCL1P47992 114 aa7.45□□□□□ -1.22
CDK5RAP3-216ENST00000579853 BTF3L4Q96K17 158 aa7.45□□□□□ -1.22
CDK5RAP3-216ENST00000579853 ALG5Q9Y673 324 aa7.45□□□□□ -1.22
CDK5RAP3-216ENST00000579853 IGLV1-50A0A075B6I6 118 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 KRTAP9-6A0A140TA67 174 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 APCSP02743 223 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 GIPP09681 153 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 FGF6P10767 208 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 GAGE2BQ13066 116 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 PRR26Q8N8Z3 221 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 OR2D3Q8NGH3 330 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
CDK5RAP3-216ENST00000579853 CCL25O15444 150 aa7.43□□□□□ -1.22
CDK5RAP3-216ENST00000579853 RPL35P42766 123 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-216ENST00000579853 CAMPP49913 170 aa7.43□□□□□ -1.22
CDK5RAP3-216ENST00000579853 SFT2D1Q8WV19 159 aa7.43□□□□□ -1.22
CDK5RAP3-216ENST00000579853 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
CDK5RAP3-216ENST00000579853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 LINC00959A0A1B0GUT2 108 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 IFNA1P01562 189 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 EIF5AP63241 154 aaKnown RBP7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 SS18Q15532 418 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 PRR4Q16378 134 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 Q5BKY6 102 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 EIF5AL1Q6IS14 154 aaKnown RBP7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 TEX261Q6UWH6 196 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 TSKUQ8WUA8 353 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 MBD3L1Q8WWY6 194 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
CDK5RAP3-216ENST00000579853 IGLV4-69A0A075B6H9 119 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 UMAD1C9J7I0 102 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 LYZL1Q6UWQ5 148 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 Q6ZNX1 250 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 KCNRGQ8N5I3 272 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 FAM210AQ96ND0 272 aa7.41□□□□□ -1.22
CDK5RAP3-216ENST00000579853 TRAV1-1A0A0B4J248 108 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 C19orf71A6NCJ1 209 aa7.4□□□□□ -1.22
CDK5RAP3-216ENST00000579853 H0Y9J4 135 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms