RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 UBE2D2P62837 147 aa9.78□□□□□ -0.84
CSNK1D-209ENST00000578904 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
CSNK1D-209ENST00000578904 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
CSNK1D-209ENST00000578904 ICOSQ9Y6W8 199 aa9.78□□□□□ -0.84
CSNK1D-209ENST00000578904 TRAV26-1A0A087WT03 109 aa9.77□□□□□ -0.85
CSNK1D-209ENST00000578904 PHLDA1Q8WV24 401 aaPredicted RBP9.77□□□□□ -0.85
CSNK1D-209ENST00000578904 HSPB8Q9UJY1 196 aa9.77□□□□□ -0.85
CSNK1D-209ENST00000578904 PDZD11Q5EBL8 140 aa9.76□□□□□ -0.85
CSNK1D-209ENST00000578904 ZFAND6Q6FIF0 208 aa9.76□□□□□ -0.85
CSNK1D-209ENST00000578904 ATP6V0E2Q8NHE4 81 aa9.76□□□□□ -0.85
CSNK1D-209ENST00000578904 URB1-AS1Q96HZ7 61 aa9.76□□□□□ -0.85
CSNK1D-209ENST00000578904 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
CSNK1D-209ENST00000578904 A0A0J9YY99 117 aa9.75□□□□□ -0.85
CSNK1D-209ENST00000578904 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
CSNK1D-209ENST00000578904 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
CSNK1D-209ENST00000578904 BTF3P20290 206 aaKnown RBP9.75□□□□□ -0.85
CSNK1D-209ENST00000578904 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
CSNK1D-209ENST00000578904 IGHV1-24A0A0C4DH33 117 aa9.74□□□□□ -0.85
CSNK1D-209ENST00000578904 NUPR1O60356 82 aa9.74□□□□□ -0.85
CSNK1D-209ENST00000578904 FABP4P15090 132 aa9.74□□□□□ -0.85
CSNK1D-209ENST00000578904 LINC00310P59036 64 aa9.74□□□□□ -0.85
CSNK1D-209ENST00000578904 NEGR1Q7Z3B1 354 aa9.74□□□□□ -0.85
CSNK1D-209ENST00000578904 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
CSNK1D-209ENST00000578904 TRBV25-1A0A075B6N4 114 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 LOC100131303A0A0U1RQF7 123 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 C3orf84H3BNL1 204 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 ATP5LO75964 103 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 TSHBP01222 138 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 CEMP1Q6PRD7 247 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 HIST1H2BLQ99880 126 aa9.73□□□□□ -0.85
CSNK1D-209ENST00000578904 IGHV3-38A0A0C4DH36 116 aa9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 H7C423 109 aa9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 UBE2L6O14933 153 aa9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 LINC00694P0DN24 101 aa9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 Q9UF83 564 aa9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-209ENST00000578904 PKIAP61925 76 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 PMCHL1Q16048 86 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 C20orf203Q8NBC4 194 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 TOMM6Q96B49 74 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
CSNK1D-209ENST00000578904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
CSNK1D-209ENST00000578904 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
CSNK1D-209ENST00000578904 TRBV6-8A0A0A6YYG3 113 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 IGLL5B9A064 214 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 NPSP0C0P6 89 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 AKR1D1P51857 326 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 CASC10Q5T4H9 136 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 Q6ZN92 141 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 ERASQ7Z444 233 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 TMEM141Q96I45 108 aa9.69□□□□□ -0.86
CSNK1D-209ENST00000578904 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 A0A096LPF7 62 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 TIRAPP58753 221 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 DGAT2L7PQ6IED9 249 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 OR10D4PQ8NGN7 298 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 TIMM17AQ99595 171 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 SPANXA1Q9NS26 97 aa9.68□□□□□ -0.86
CSNK1D-209ENST00000578904 A0A096LNJ9 63 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 C20orf202A1L168 122 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 CHCHD7Q9BUK0 85 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
CSNK1D-209ENST00000578904 CSMD3Q7Z407 3707 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 TRAV8-6A0A0B4J262 113 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 PRSS1P07477 247 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 TCTAP57738 103 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 KRTDAPP60985 99 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 LELP1Q5T871 98 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 DEFB104AQ8WTQ1 72 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
CSNK1D-209ENST00000578904 LOC105371267A0A1B0GV96 52 aa9.65□□□□□ -0.86
CSNK1D-209ENST00000578904 IFITM10A6NMD0 228 aa9.65□□□□□ -0.86
CSNK1D-209ENST00000578904 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
CSNK1D-209ENST00000578904 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
CSNK1D-209ENST00000578904 CSDC2Q9Y534 153 aaKnown RBP9.65□□□□□ -0.86
CSNK1D-209ENST00000578904 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-209ENST00000578904 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-209ENST00000578904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 IGIPA6NJ69 53 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 SYS1-DBNDD2H3BUS1 97 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 CCL18P55774 89 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 OR5A1Q8NGJ0 315 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 VCX2Q9H322 139 aa9.63□□□□□ -0.87
CSNK1D-209ENST00000578904 FGF6P10767 208 aa9.62□□□□□ -0.87
CSNK1D-209ENST00000578904 MRPS36P82909 103 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms