RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 Q86TA4 180 aa6.29□□□□□ -1.4
GGA3-206ENST00000578773 SCGB1C1Q8TD33 95 aa6.29□□□□□ -1.4
GGA3-206ENST00000578773 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
GGA3-206ENST00000578773 CCL25O15444 150 aa6.28□□□□□ -1.4
GGA3-206ENST00000578773 APOMO95445 188 aa6.28□□□□□ -1.4
GGA3-206ENST00000578773 SIX6O95475 246 aa6.28□□□□□ -1.4
GGA3-206ENST00000578773 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
GGA3-206ENST00000578773 SAPCD1Q5SSQ6 148 aa6.28□□□□□ -1.4
GGA3-206ENST00000578773 ZNF561-AS1K7EIQ3 104 aa6.27□□□□□ -1.41
GGA3-206ENST00000578773 M0QY20 66 aa6.27□□□□□ -1.41
GGA3-206ENST00000578773 UBE2L6O14933 153 aa6.27□□□□□ -1.41
GGA3-206ENST00000578773 CNPY1Q3B7I2 92 aa6.27□□□□□ -1.41
GGA3-206ENST00000578773 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
GGA3-206ENST00000578773 NUDT15Q9NV35 164 aa6.27□□□□□ -1.41
GGA3-206ENST00000578773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.26□□□□□ -1.41
GGA3-206ENST00000578773 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
GGA3-206ENST00000578773 H0YIZ8 118 aa6.26□□□□□ -1.41
GGA3-206ENST00000578773 PLA2G10O15496 165 aa6.26□□□□□ -1.41
GGA3-206ENST00000578773 SUMO4Q6EEV6 95 aa6.26□□□□□ -1.41
GGA3-206ENST00000578773 EIF5AL1Q6IS14 154 aaKnown RBP6.26□□□□□ -1.41
GGA3-206ENST00000578773 LINC00304Q8N9R0 145 aa6.26□□□□□ -1.41
GGA3-206ENST00000578773 OR5A1Q8NGJ0 315 aa6.26□□□□□ -1.41
GGA3-206ENST00000578773 TSHBP01222 138 aa6.25□□□□□ -1.41
GGA3-206ENST00000578773 MGPP08493 103 aa6.25□□□□□ -1.41
GGA3-206ENST00000578773 IL7P13232 177 aa6.25□□□□□ -1.41
GGA3-206ENST00000578773 LINC00959A0A1B0GUT2 108 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 CCDC160A6NGH7 325 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 LYRM1O43325 122 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 ZNF861PO60384 105 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 H2AFB2P0C5Z0 115 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 GCHFRP30047 84 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 UBE2BP63146 152 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 RNF151Q2KHN1 245 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 TSKUQ8WUA8 353 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
GGA3-206ENST00000578773 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
GGA3-206ENST00000578773 M0QXV9 152 aa6.23□□□□□ -1.41
GGA3-206ENST00000578773 BCL2L11O43521 198 aa6.23□□□□□ -1.41
GGA3-206ENST00000578773 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
GGA3-206ENST00000578773 RNASEKQ6P5S7 137 aaKnown RBP6.23□□□□□ -1.41
GGA3-206ENST00000578773 WFDC1Q9HC57 220 aa6.23□□□□□ -1.41
GGA3-206ENST00000578773 HSPB11Q9Y547 144 aa6.23□□□□□ -1.41
GGA3-206ENST00000578773 STAG3L2P0CL84 134 aa6.22□□□□□ -1.41
GGA3-206ENST00000578773 STAG3L3P0CL85 134 aa6.22□□□□□ -1.41
GGA3-206ENST00000578773 CDC34P49427 236 aaPredicted RBP6.22□□□□□ -1.41
GGA3-206ENST00000578773 Q6ZNX1 250 aa6.22□□□□□ -1.41
GGA3-206ENST00000578773 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
GGA3-206ENST00000578773 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
GGA3-206ENST00000578773 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
GGA3-206ENST00000578773 SNAI2O43623 268 aa6.21□□□□□ -1.42
GGA3-206ENST00000578773 SPANXN1Q5VSR9 72 aa6.21□□□□□ -1.42
GGA3-206ENST00000578773 AMMECR1LQ6DCA0 310 aa6.21□□□□□ -1.42
GGA3-206ENST00000578773 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
GGA3-206ENST00000578773 ISOC2Q96AB3 205 aa6.21□□□□□ -1.42
GGA3-206ENST00000578773 RBM38Q9H0Z9 239 aaKnown RBP6.21□□□□□ -1.42
GGA3-206ENST00000578773 PEX7O00628 323 aa6.2□□□□□ -1.42
GGA3-206ENST00000578773 COTL1Q14019 142 aa6.2□□□□□ -1.42
GGA3-206ENST00000578773 COX8CQ7Z4L0 72 aa6.2□□□□□ -1.42
GGA3-206ENST00000578773 A6NHS1 94 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 M0R2T5 61 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 DEFA1P59665 94 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 UBE2G2P60604 165 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 C10orf25Q5T742 122 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 PPP1R1CQ8WVI7 109 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 TMEM167BQ9NRX6 74 aa6.19□□□□□ -1.42
GGA3-206ENST00000578773 CXorf1O96002 111 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 SMIM17P0DL12 118 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 SS18Q15532 418 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 RASL11AQ6T310 242 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 AP1S3Q96PC3 154 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 MED28Q9H204 178 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
GGA3-206ENST00000578773 FAM240BA0A1B0GVZ2 78 aa6.17□□□□□ -1.42
GGA3-206ENST00000578773 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
GGA3-206ENST00000578773 H2BFSP57053 126 aa6.17□□□□□ -1.42
GGA3-206ENST00000578773 LINC00242Q5T6M2 205 aa6.17□□□□□ -1.42
GGA3-206ENST00000578773 CTDSP1Q9GZU7 261 aa6.17□□□□□ -1.42
GGA3-206ENST00000578773 A0A1W2PRE2 83 aa6.16□□□□□ -1.42
GGA3-206ENST00000578773 MPC2O95563 127 aa6.16□□□□□ -1.42
GGA3-206ENST00000578773 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
GGA3-206ENST00000578773 NTF3P20783 257 aa6.16□□□□□ -1.42
GGA3-206ENST00000578773 C2orf48Q96LS8 159 aa6.16□□□□□ -1.42
GGA3-206ENST00000578773 ZFP30Q9Y2G7 519 aa6.16□□□□□ -1.42
GGA3-206ENST00000578773 UBE2G1P62253 170 aa6.15□□□□□ -1.42
GGA3-206ENST00000578773 SPAG11BQ08648 103 aa6.15□□□□□ -1.42
GGA3-206ENST00000578773 C9orf129Q5T035 196 aaKnown RBP6.15□□□□□ -1.42
GGA3-206ENST00000578773 ACTR3CQ9C0K3 210 aaPredicted RBP6.15□□□□□ -1.42
GGA3-206ENST00000578773 NIT2Q9NQR4 276 aa6.15□□□□□ -1.42
GGA3-206ENST00000578773 LTAP01374 205 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 ESDP10768 282 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 MALP21145 153 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 ATP6V0CP27449 155 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 C5orf38Q86SI9 138 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 HIST1H2BAQ96A08 127 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 C6orf48Q9UBA6 75 aa6.14□□□□□ -1.43
GGA3-206ENST00000578773 COX7A2LO14548 114 aa6.13□□□□□ -1.43
GGA3-206ENST00000578773 PET100P0DJ07 73 aa6.13□□□□□ -1.43
GGA3-206ENST00000578773 RNASE13Q5GAN3 156 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms