RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 LYRM9A8MSI8 78 aa12.07□□□□□ -0.48
SREBF1-218ENST00000578469 MIFP14174 115 aa12.07□□□□□ -0.48
SREBF1-218ENST00000578469 RNF183Q96D59 192 aa12.07□□□□□ -0.48
SREBF1-218ENST00000578469 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
SREBF1-218ENST00000578469 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
SREBF1-218ENST00000578469 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
SREBF1-218ENST00000578469 PMCHL2Q9BQD1 86 aa12.06□□□□□ -0.48
SREBF1-218ENST00000578469 TRBV6-4A0A1B0GX49 114 aa12.05□□□□□ -0.48
SREBF1-218ENST00000578469 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
SREBF1-218ENST00000578469 TRBV7-3A0A075B6L6 115 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
SREBF1-218ENST00000578469 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 COTL1Q14019 142 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 C20orf203Q8NBC4 194 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 DEFB104AQ8WTQ1 72 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 TIMM17AQ99595 171 aa12.04□□□□□ -0.48
SREBF1-218ENST00000578469 A0A087WX48 190 aa12.03□□□□□ -0.48
SREBF1-218ENST00000578469 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
SREBF1-218ENST00000578469 DDTP30046 118 aa12.03□□□□□ -0.48
SREBF1-218ENST00000578469 ODF1Q14990 250 aa12.03□□□□□ -0.48
SREBF1-218ENST00000578469 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
SREBF1-218ENST00000578469 ZMAT4Q9H898 229 aa12.03□□□□□ -0.48
SREBF1-218ENST00000578469 FHL2Q14192 279 aa12.02□□□□□ -0.49
SREBF1-218ENST00000578469 MAJINQ3KP22 176 aa12.02□□□□□ -0.49
SREBF1-218ENST00000578469 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.49
SREBF1-218ENST00000578469 DAZ4Q86SG3 579 aaKnown RBP12.02□□□□□ -0.49
SREBF1-218ENST00000578469 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
SREBF1-218ENST00000578469 DAZ3Q9NR90 486 aaKnown RBP12.02□□□□□ -0.49
SREBF1-218ENST00000578469 DKK2Q9UBU2 259 aa12.02□□□□□ -0.49
SREBF1-218ENST00000578469 Q9UF83 564 aa12.02□□□□□ -0.49
SREBF1-218ENST00000578469 hDV102S1A0JD36 115 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 C3orf84H3BNL1 204 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 DPM2O94777 84 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 IGKCP01834 107 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 RPL39P62891 51 aaKnown RBP12.01□□□□□ -0.49
SREBF1-218ENST00000578469 BAALCQ8WXS3 180 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
SREBF1-218ENST00000578469 STAB2Q8WWQ8 2551 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 GAGE12JA6NER3 117 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 GAGE1Q13065 139 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 GAGE4Q13068 117 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 GAGE5Q13069 117 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 GAGE13Q4V321 117 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 Q8NAQ8 132 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 UQCR10Q9UDW1 63 aa12□□□□□ -0.49
SREBF1-218ENST00000578469 CHTOPQ9Y3Y2 248 aaKnown RBP12□□□□□ -0.49
SREBF1-218ENST00000578469 IGHV3-38A0A0C4DH36 116 aa11.99□□□□□ -0.49
SREBF1-218ENST00000578469 LINC00587B1AMM8 73 aa11.99□□□□□ -0.49
SREBF1-218ENST00000578469 PLNP26678 52 aa11.99□□□□□ -0.49
SREBF1-218ENST00000578469 UBE2D3P61077 147 aa11.99□□□□□ -0.49
SREBF1-218ENST00000578469 UBE2D2P62837 147 aa11.99□□□□□ -0.49
SREBF1-218ENST00000578469 PAPPA-AS1Q5QFB9 102 aa11.99□□□□□ -0.49
SREBF1-218ENST00000578469 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 F8VRH5 84 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 SPART-AS1P0CW21 52 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 IGLC3P0DOY3 106 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 DAD1P61803 113 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 PMVKQ15126 192 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 MRPL35Q9NZE8 188 aaKnown RBP11.98□□□□□ -0.49
SREBF1-218ENST00000578469 HHLA3Q9XRX5 114 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
SREBF1-218ENST00000578469 PRSS29PA6NIE9 313 aa11.97□□□□□ -0.49
SREBF1-218ENST00000578469 NPSP0C0P6 89 aa11.97□□□□□ -0.49
SREBF1-218ENST00000578469 CHCHD7Q9BUK0 85 aa11.97□□□□□ -0.49
SREBF1-218ENST00000578469 DEFB4AO15263 64 aa11.96□□□□□ -0.49
SREBF1-218ENST00000578469 SMAGPQ0VAQ4 97 aa11.96□□□□□ -0.49
SREBF1-218ENST00000578469 SPANXA1Q9NS26 97 aa11.96□□□□□ -0.49
SREBF1-218ENST00000578469 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
SREBF1-218ENST00000578469 CST9LQ9H4G1 147 aa11.95□□□□□ -0.5
SREBF1-218ENST00000578469 PRO0255Q9UI72 69 aa11.95□□□□□ -0.5
SREBF1-218ENST00000578469 DYNC2H1Q8NCM8 4307 aaKnown RBP11.95□□□□□ -0.5
SREBF1-218ENST00000578469 CRYBA4P53673 196 aa11.94□□□□□ -0.5
SREBF1-218ENST00000578469 TMEM97Q5BJF2 176 aa11.94□□□□□ -0.5
SREBF1-218ENST00000578469 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
SREBF1-218ENST00000578469 VCX2Q9H322 139 aa11.94□□□□□ -0.5
SREBF1-218ENST00000578469 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
SREBF1-218ENST00000578469 ATP5G1P05496 136 aa11.93□□□□□ -0.5
SREBF1-218ENST00000578469 STPG4Q8N801 248 aa11.93□□□□□ -0.5
SREBF1-218ENST00000578469 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
SREBF1-218ENST00000578469 IGLV4-3A0A075B6K6 122 aa11.92□□□□□ -0.5
SREBF1-218ENST00000578469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-218ENST00000578469 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-218ENST00000578469 ANKRD39Q53RE8 183 aa11.92□□□□□ -0.5
SREBF1-218ENST00000578469 SLC25A34Q6PIV7 304 aa11.92□□□□□ -0.5
SREBF1-218ENST00000578469 PAX4O43316 350 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 HNRNPA3P51991 378 aaKnown RBP11.91□□□□□ -0.5
SREBF1-218ENST00000578469 ZC2HC1BQ5TFG8 222 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 DGAT2L7PQ6IED9 249 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 MUC7Q8TAX7 377 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 UBE2D4Q9Y2X8 147 aa11.91□□□□□ -0.5
SREBF1-218ENST00000578469 RYR2Q92736 4967 aa11.9□□□□□ -0.5
SREBF1-218ENST00000578469 TRBV25-1A0A075B6N4 114 aa11.9□□□□□ -0.5
SREBF1-218ENST00000578469 UBE2L6O14933 153 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms