RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 AMTP48728 403 aa9.62□□□□□ -0.87
RN7SL560P-201ENST00000577943 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
RN7SL560P-201ENST00000577943 GFRA4Q9GZZ7 299 aa9.62□□□□□ -0.87
RN7SL560P-201ENST00000577943 RNASE7Q9H1E1 156 aaKnown RBP9.62□□□□□ -0.87
RN7SL560P-201ENST00000577943 RPP21Q9H633 154 aaKnown RBP9.62□□□□□ -0.87
RN7SL560P-201ENST00000577943 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
RN7SL560P-201ENST00000577943 hDV102S1A0JD36 115 aa9.61□□□□□ -0.87
RN7SL560P-201ENST00000577943 OCC1Q8TAD7 63 aa9.61□□□□□ -0.87
RN7SL560P-201ENST00000577943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
RN7SL560P-201ENST00000577943 K7EN84 100 aa9.6□□□□□ -0.87
RN7SL560P-201ENST00000577943 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
RN7SL560P-201ENST00000577943 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
RN7SL560P-201ENST00000577943 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
RN7SL560P-201ENST00000577943 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
RN7SL560P-201ENST00000577943 TRAV26-2A0A0B4J265 109 aa9.59□□□□□ -0.87
RN7SL560P-201ENST00000577943 OXTP01178 125 aa9.59□□□□□ -0.87
RN7SL560P-201ENST00000577943 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.87
RN7SL560P-201ENST00000577943 SMIM15Q7Z3B0 74 aa9.59□□□□□ -0.87
RN7SL560P-201ENST00000577943 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
RN7SL560P-201ENST00000577943 FAT3Q8TDW7 4589 aa9.58□□□□□ -0.88
RN7SL560P-201ENST00000577943 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.58□□□□□ -0.88
RN7SL560P-201ENST00000577943 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
RN7SL560P-201ENST00000577943 PANO1I0J062 215 aa9.58□□□□□ -0.88
RN7SL560P-201ENST00000577943 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
RN7SL560P-201ENST00000577943 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
RN7SL560P-201ENST00000577943 IGHV3-64A0A075B6Q5 118 aa9.56□□□□□ -0.88
RN7SL560P-201ENST00000577943 GATCO43716 136 aaKnown RBP9.56□□□□□ -0.88
RN7SL560P-201ENST00000577943 BLOC1S1P78537 153 aa9.56□□□□□ -0.88
RN7SL560P-201ENST00000577943 AMMECR1LQ6DCA0 310 aa9.56□□□□□ -0.88
RN7SL560P-201ENST00000577943 Q6ZNX1 250 aa9.56□□□□□ -0.88
RN7SL560P-201ENST00000577943 GTSF1Q8WW33 167 aa9.56□□□□□ -0.88
RN7SL560P-201ENST00000577943 GAGE12HA6NDE8 117 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 A8MWL6 223 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 NCR2O95944 276 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 FOXA3P55318 350 aaPredicted RBP9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 TEX261Q6UWH6 196 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 ALKAL2Q6UX46 152 aa9.55□□□□□ -0.88
RN7SL560P-201ENST00000577943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
RN7SL560P-201ENST00000577943 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
RN7SL560P-201ENST00000577943 APCSP02743 223 aa9.54□□□□□ -0.88
RN7SL560P-201ENST00000577943 SLPIP03973 132 aa9.54□□□□□ -0.88
RN7SL560P-201ENST00000577943 CEBPGP53567 150 aa9.54□□□□□ -0.88
RN7SL560P-201ENST00000577943 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
RN7SL560P-201ENST00000577943 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
RN7SL560P-201ENST00000577943 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
RN7SL560P-201ENST00000577943 FAM231DQ6ZW35 169 aa9.53□□□□□ -0.88
RN7SL560P-201ENST00000577943 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
RN7SL560P-201ENST00000577943 C15orf56Q8N910 161 aa9.53□□□□□ -0.88
RN7SL560P-201ENST00000577943 H7C423 109 aa9.52□□□□□ -0.89
RN7SL560P-201ENST00000577943 CHTF8P0CG12 524 aa9.52□□□□□ -0.89
RN7SL560P-201ENST00000577943 PMCHP20382 165 aa9.52□□□□□ -0.89
RN7SL560P-201ENST00000577943 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
RN7SL560P-201ENST00000577943 BORCS7Q96B45 105 aa9.52□□□□□ -0.89
RN7SL560P-201ENST00000577943 A0A087WYN8 130 aa9.51□□□□□ -0.89
RN7SL560P-201ENST00000577943 FGF6P10767 208 aa9.51□□□□□ -0.89
RN7SL560P-201ENST00000577943 HIGD2BQ4VC39 106 aa9.51□□□□□ -0.89
RN7SL560P-201ENST00000577943 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
RN7SL560P-201ENST00000577943 hCG_2014768A0A024R1R8 64 aa9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 I3L3M4 83 aa9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 CT83Q5H943 113 aa9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 LYPD6BQ8NI32 183 aa9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 SPACA4Q8TDM5 124 aa9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 BTF3L4Q96K17 158 aa9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
RN7SL560P-201ENST00000577943 ZNF25P17030 456 aaPredicted RBP9.49□□□□□ -0.89
RN7SL560P-201ENST00000577943 COX6A2Q02221 97 aa9.49□□□□□ -0.89
RN7SL560P-201ENST00000577943 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
RN7SL560P-201ENST00000577943 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
RN7SL560P-201ENST00000577943 ST20Q9HBF5 79 aa9.49□□□□□ -0.89
RN7SL560P-201ENST00000577943 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
RN7SL560P-201ENST00000577943 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
RN7SL560P-201ENST00000577943 FAM231BA6NCW3 169 aa9.48□□□□□ -0.89
RN7SL560P-201ENST00000577943 HIGD1CA8MV81 97 aa9.48□□□□□ -0.89
RN7SL560P-201ENST00000577943 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
RN7SL560P-201ENST00000577943 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
RN7SL560P-201ENST00000577943 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
RN7SL560P-201ENST00000577943 Q6ZRU5 148 aa9.47□□□□□ -0.89
RN7SL560P-201ENST00000577943 TSKUQ8WUA8 353 aa9.47□□□□□ -0.89
RN7SL560P-201ENST00000577943 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
RN7SL560P-201ENST00000577943 ZNF727A8MUV8 499 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 XCL1P47992 114 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 FOXI1Q12951 378 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 MAJINQ3KP22 176 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 LINC01551Q86U37 167 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 TMEM191AQ9H0A3 160 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.9
RN7SL560P-201ENST00000577943 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 IGKV2-24A0A0C4DH68 120 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 LINC00959A0A1B0GUT2 108 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 TSHBP01222 138 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 ESDP10768 282 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
RN7SL560P-201ENST00000577943 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms