RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 SLC25A29Q8N8R3 303 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 PHLDA1Q8WV24 401 aaPredicted RBP7.07□□□□□ -1.28
CRLF3-202ENST00000577725 TMEM70Q9BUB7 260 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
CRLF3-202ENST00000577725 NIT2Q9NQR4 276 aa7.07□□□□□ -1.28
CRLF3-202ENST00000577725 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 H7C1H1 209 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 HSBP1O75506 76 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 FABP4P15090 132 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 S100A2P29034 98 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 AMTP48728 403 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 NANOS2P60321 138 aaKnown RBP7.06□□□□□ -1.28
CRLF3-202ENST00000577725 ZNRF2Q8NHG8 242 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 HIST1H2BLQ99880 126 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 C20orf78Q9BR46 151 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
CRLF3-202ENST00000577725 AP5S1Q9NUS5 200 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
CRLF3-202ENST00000577725 IGHV1-24A0A0C4DH33 117 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 A0A0J9YY99 117 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 F5H768 121 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 PPP1R17O96001 155 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 ESDP10768 282 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 POLR2KP53803 58 aaKnown RBP7.05□□□□□ -1.28
CRLF3-202ENST00000577725 LINC00173Q6ZV60 143 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
CRLF3-202ENST00000577725 C18orf15Q96N68 181 aa7.05□□□□□ -1.28
CRLF3-202ENST00000577725 ATP5G1P05496 136 aa7.04□□□□□ -1.28
CRLF3-202ENST00000577725 AKR1D1P51857 326 aa7.04□□□□□ -1.28
CRLF3-202ENST00000577725 CRYBA4P53673 196 aa7.04□□□□□ -1.28
CRLF3-202ENST00000577725 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
CRLF3-202ENST00000577725 Q6ZTC4 211 aa7.04□□□□□ -1.28
CRLF3-202ENST00000577725 HHLA3Q9XRX5 114 aa7.04□□□□□ -1.28
CRLF3-202ENST00000577725 A0A096LNJ9 63 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 TEX48A0A1B0GUV7 120 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 LINC01546A6NGU7 62 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 VCYO14598 125 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 PAX4O43316 350 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 CIDEAO60543 219 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 TSHBP01222 138 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 GYPEP15421 78 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 RPL32P62910 135 aaKnown RBP7.03□□□□□ -1.28
CRLF3-202ENST00000577725 RPL36AP83881 106 aaKnown RBP7.03□□□□□ -1.28
CRLF3-202ENST00000577725 LAGE3Q14657 143 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 RHOHQ15669 191 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 OR10D4PQ8NGN7 298 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 RPL36ALQ969Q0 106 aaKnown RBP7.03□□□□□ -1.28
CRLF3-202ENST00000577725 DNAJC30Q96LL9 226 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
CRLF3-202ENST00000577725 TRBV7-3A0A075B6L6 115 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 A0A096LPF7 62 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 TRBV10-1A0A0K0K1A3 114 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 TRBV27A0A0K0K1C4 114 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 TRBV6-4A0A1B0GX49 114 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 I3L3M4 83 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 NUDT3O95989 172 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
CRLF3-202ENST00000577725 FCER1GP30273 86 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 UBE2D3P61077 147 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 UBE2D2P62837 147 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 C11orf45Q8TAV5 145 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 TMEM18Q96B42 140 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 VSIG2Q96IQ7 327 aa7.02□□□□□ -1.29
CRLF3-202ENST00000577725 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
CRLF3-202ENST00000577725 TRAV26-1A0A087WT03 109 aa7.01□□□□□ -1.29
CRLF3-202ENST00000577725 HBDP02042 147 aa7.01□□□□□ -1.29
CRLF3-202ENST00000577725 LINC00694P0DN24 101 aa7.01□□□□□ -1.29
CRLF3-202ENST00000577725 KIR2DL4Q99706 377 aa7.01□□□□□ -1.29
CRLF3-202ENST00000577725 PRO0255Q9UI72 69 aa7.01□□□□□ -1.29
CRLF3-202ENST00000577725 A0A1B0GVY2 172 aa7□□□□□ -1.29
CRLF3-202ENST00000577725 RPL39P62891 51 aaKnown RBP7□□□□□ -1.29
CRLF3-202ENST00000577725 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
CRLF3-202ENST00000577725 LINC00336Q6ZUF6 198 aa7□□□□□ -1.29
CRLF3-202ENST00000577725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
CRLF3-202ENST00000577725 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
CRLF3-202ENST00000577725 H0Y8G0 127 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 KRTDAPP60985 99 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 COTL1Q14019 142 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 C2orf66Q6UXQ4 117 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 NTM-AS1Q6ZSK4 140 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 SPATA12Q7Z6I5 190 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 CHCHD7Q9BUK0 85 aa6.99□□□□□ -1.29
CRLF3-202ENST00000577725 DEFB131BA0A096LNP1 70 aa6.98□□□□□ -1.29
CRLF3-202ENST00000577725 NUPR2A6NF83 97 aa6.98□□□□□ -1.29
CRLF3-202ENST00000577725 C3orf79P0CE67 100 aa6.98□□□□□ -1.29
CRLF3-202ENST00000577725 LGALS9CQ6DKI2 356 aa6.98□□□□□ -1.29
CRLF3-202ENST00000577725 ATP6V0E2Q8NHE4 81 aa6.98□□□□□ -1.29
CRLF3-202ENST00000577725 HSPG2P98160 4391 aa6.98□□□□□ -1.29
CRLF3-202ENST00000577725 VPS13DQ5THJ4 4388 aa6.97□□□□□ -1.29
CRLF3-202ENST00000577725 DYNC1H1Q14204 4646 aaKnown RBP6.97□□□□□ -1.29
CRLF3-202ENST00000577725 DAZ4Q86SG3 579 aaKnown RBP6.97□□□□□ -1.29
CRLF3-202ENST00000577725 MAPKAPK5-AS1Q8N8E1 139 aa6.97□□□□□ -1.29
CRLF3-202ENST00000577725 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
CRLF3-202ENST00000577725 SCGB3A1Q96QR1 104 aa6.97□□□□□ -1.29
CRLF3-202ENST00000577725 DAZ3Q9NR90 486 aaKnown RBP6.97□□□□□ -1.29
CRLF3-202ENST00000577725 CYSLTR1Q9Y271 337 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms