RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 LYPD6BQ8NI32 183 aa8.8□□□□□ -1
CUEDC1-204ENST00000577497 CIRBP-AS1Q8TBR5 109 aa8.8□□□□□ -1
CUEDC1-204ENST00000577497 TMEM243Q9BU79 118 aa8.8□□□□□ -1
CUEDC1-204ENST00000577497 TMEM250H0YL14 139 aa8.79□□□□□ -1
CUEDC1-204ENST00000577497 C14orf177Q52M58 125 aa8.79□□□□□ -1
CUEDC1-204ENST00000577497 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
CUEDC1-204ENST00000577497 PGLYRP4Q96LB8 373 aa8.79□□□□□ -1
CUEDC1-204ENST00000577497 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
CUEDC1-204ENST00000577497 CEBPGP53567 150 aa8.78□□□□□ -1
CUEDC1-204ENST00000577497 KRTAP10-4P60372 401 aaPredicted RBP8.78□□□□□ -1
CUEDC1-204ENST00000577497 BLOC1S1P78537 153 aa8.78□□□□□ -1
CUEDC1-204ENST00000577497 AMTP48728 403 aa8.77□□□□□ -1.01
CUEDC1-204ENST00000577497 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
CUEDC1-204ENST00000577497 A0A1B0GVG6 124 aa8.76□□□□□ -1.01
CUEDC1-204ENST00000577497 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
CUEDC1-204ENST00000577497 COTL1Q14019 142 aa8.76□□□□□ -1.01
CUEDC1-204ENST00000577497 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
CUEDC1-204ENST00000577497 PANO1I0J062 215 aa8.75□□□□□ -1.01
CUEDC1-204ENST00000577497 UBE2L6O14933 153 aa8.75□□□□□ -1.01
CUEDC1-204ENST00000577497 GAS8-AS1O95177 125 aa8.75□□□□□ -1.01
CUEDC1-204ENST00000577497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.75□□□□□ -1.01
CUEDC1-204ENST00000577497 DGAT2L7PQ6IED9 249 aa8.74□□□□□ -1.01
CUEDC1-204ENST00000577497 LINC01551Q86U37 167 aa8.74□□□□□ -1.01
CUEDC1-204ENST00000577497 C9orf163Q8N9P6 203 aa8.74□□□□□ -1.01
CUEDC1-204ENST00000577497 EIF5A2Q9GZV4 153 aaKnown RBP8.74□□□□□ -1.01
CUEDC1-204ENST00000577497 LRP1Q07954 4544 aaKnown RBP8.74□□□□□ -1.01
CUEDC1-204ENST00000577497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 A8MWL6 223 aa8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 SLPIP03973 132 aa8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 FAM210AQ96ND0 272 aa8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 SMIM7Q9BQ49 75 aa8.73□□□□□ -1.01
CUEDC1-204ENST00000577497 IGKV3OR2-268A0A0C4DH90 116 aa8.72□□□□□ -1.01
CUEDC1-204ENST00000577497 hDV102S1A0JD36 115 aa8.72□□□□□ -1.01
CUEDC1-204ENST00000577497 SDHAF1A6NFY7 115 aa8.72□□□□□ -1.01
CUEDC1-204ENST00000577497 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
CUEDC1-204ENST00000577497 CT83Q5H943 113 aa8.72□□□□□ -1.01
CUEDC1-204ENST00000577497 HIGD1CA8MV81 97 aa8.71□□□□□ -1.02
CUEDC1-204ENST00000577497 CNBPP62633 177 aaKnown RBP8.71□□□□□ -1.02
CUEDC1-204ENST00000577497 SDIM1Q6ZPB5 146 aa8.71□□□□□ -1.02
CUEDC1-204ENST00000577497 SMIM15Q7Z3B0 74 aa8.71□□□□□ -1.02
CUEDC1-204ENST00000577497 CLRN3Q8NCR9 226 aa8.71□□□□□ -1.02
CUEDC1-204ENST00000577497 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 J3QL48 77 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 APCSP02743 223 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 RPS10P46783 165 aaKnown RBP8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 TSKUQ8WUA8 353 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 RNF185Q96GF1 192 aa8.7□□□□□ -1.02
CUEDC1-204ENST00000577497 TRBV6-5A0A0K0K1A5 114 aa8.69□□□□□ -1.02
CUEDC1-204ENST00000577497 FAM231BA6NCW3 169 aa8.69□□□□□ -1.02
CUEDC1-204ENST00000577497 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
CUEDC1-204ENST00000577497 NCR2O95944 276 aa8.69□□□□□ -1.02
CUEDC1-204ENST00000577497 FGF6P10767 208 aa8.69□□□□□ -1.02
CUEDC1-204ENST00000577497 TEX261Q6UWH6 196 aa8.69□□□□□ -1.02
CUEDC1-204ENST00000577497 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 C9JQL5 133 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 TSHBP01222 138 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 HNRNPA3P51991 378 aaKnown RBP8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 AMMECR1LQ6DCA0 310 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 RNASEKQ6P5S7 137 aaKnown RBP8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 AMN1Q8IY45 258 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 TMEM191AQ9H0A3 160 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 OSTCQ9NRP0 149 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 TMEM242Q9NWH2 141 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 V9GYV3 84 aa8.68□□□□□ -1.02
CUEDC1-204ENST00000577497 I3L3M4 83 aa8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 NDUFS6O75380 124 aaKnown RBP8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 RAB4AP20338 218 aa8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 PKHD1L1Q86WI1 4243 aa8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 CHCHD10Q8WYQ3 142 aaPredicted RBP8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 ISOC2Q96AB3 205 aa8.67□□□□□ -1.02
CUEDC1-204ENST00000577497 SMKR1H3BMG3 65 aa8.66□□□□□ -1.02
CUEDC1-204ENST00000577497 ESDP10768 282 aa8.66□□□□□ -1.02
CUEDC1-204ENST00000577497 PMCHP20382 165 aa8.66□□□□□ -1.02
CUEDC1-204ENST00000577497 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
CUEDC1-204ENST00000577497 NUP35Q8NFH5 326 aa8.66□□□□□ -1.02
CUEDC1-204ENST00000577497 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
CUEDC1-204ENST00000577497 IGHV3-64A0A075B6Q5 118 aa8.65□□□□□ -1.02
CUEDC1-204ENST00000577497 H7C423 109 aa8.65□□□□□ -1.02
CUEDC1-204ENST00000577497 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
CUEDC1-204ENST00000577497 RPL23P62829 140 aaKnown RBP8.65□□□□□ -1.02
CUEDC1-204ENST00000577497 FOXI1Q12951 378 aa8.65□□□□□ -1.02
CUEDC1-204ENST00000577497 AP5S1Q9NUS5 200 aa8.65□□□□□ -1.02
CUEDC1-204ENST00000577497 TMEM241Q24JQ0 296 aa8.64□□□□□ -1.03
CUEDC1-204ENST00000577497 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
CUEDC1-204ENST00000577497 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
CUEDC1-204ENST00000577497 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
CUEDC1-204ENST00000577497 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
CUEDC1-204ENST00000577497 XCL1P47992 114 aa8.63□□□□□ -1.03
CUEDC1-204ENST00000577497 ADIRFQ15847 76 aa8.63□□□□□ -1.03
CUEDC1-204ENST00000577497 NRACQ8N912 160 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms