RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 ATP6V1G1O75348 118 aa5.84□□□□□ -1.47
NUP88-211ENST00000575976 SCO1O75880 301 aa5.84□□□□□ -1.47
NUP88-211ENST00000575976 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
NUP88-211ENST00000575976 COTL1Q14019 142 aa5.84□□□□□ -1.47
NUP88-211ENST00000575976 TMEM97Q5BJF2 176 aa5.84□□□□□ -1.47
NUP88-211ENST00000575976 PRELID3AQ96N28 172 aa5.84□□□□□ -1.47
NUP88-211ENST00000575976 MRPL18Q9H0U6 180 aaKnown RBP5.84□□□□□ -1.47
NUP88-211ENST00000575976 IGHV1-24A0A0C4DH33 117 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 TRBV27A0A0K0K1C4 114 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 I3L3M4 83 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 M0R2N4 97 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 VCYO14598 125 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 PHOX2AO14813 284 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 MT-ND6P03923 174 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 S100A6P06703 90 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 DNAH10OSP0CZ25 163 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 FABP9Q0Z7S8 132 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 C20orf78Q9BR46 151 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 TRAPPC1Q9Y5R8 145 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
NUP88-211ENST00000575976 TRBV25-1A0A075B6N4 114 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 NBDYA0A0U1RRE5 68 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 LOC389332A0A1B0GUA5 103 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 TSHBP01222 138 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 IGHV3-30P01768 117 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 IGHV3-30-3P0DP02 117 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 IGHV3-30-5P0DP03 117 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 S100A1P23297 94 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 AMTP48728 403 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 CTAG1AP78358 180 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 IQCJQ1A5X6 159 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 NIT1Q86X76 327 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 Q8N3U1 123 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 SMIM2Q9BVW6 85 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 LAMTOR2Q9Y2Q5 125 aa5.82□□□□□ -1.48
NUP88-211ENST00000575976 COLCA2A8K830 154 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 TMEM262E9PQX1 116 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 RPL32P62910 135 aaKnown RBP5.81□□□□□ -1.48
NUP88-211ENST00000575976 GAGE6Q13070 117 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 ODF1Q14990 250 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 LINC01556Q5JQF7 62 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 Q6ZR54 194 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 LINC00469Q8N7U9 141 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 CHCHD5Q9BSY4 110 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 ALKBH7Q9BT30 221 aaPredicted RBP5.81□□□□□ -1.48
NUP88-211ENST00000575976 TMEM243Q9BU79 118 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 CHCHD7Q9BUK0 85 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 KRTAP1-5Q9BYS1 174 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 MAP1LC3AQ9H492 121 aa5.81□□□□□ -1.48
NUP88-211ENST00000575976 TCAPO15273 167 aa5.8□□□□□ -1.48
NUP88-211ENST00000575976 ESDP10768 282 aa5.8□□□□□ -1.48
NUP88-211ENST00000575976 FCER1GP30273 86 aa5.8□□□□□ -1.48
NUP88-211ENST00000575976 KIR2DL4Q99706 377 aa5.8□□□□□ -1.48
NUP88-211ENST00000575976 FRAS1Q86XX4 4008 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.79□□□□□ -1.48
NUP88-211ENST00000575976 TRAV9-2A0A087WT02 112 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 A0A087WX48 190 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 IGKV2-29A2NJV5 120 aaPredicted RBP5.79□□□□□ -1.48
NUP88-211ENST00000575976 MPV17L2Q567V2 206 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 TTC32Q5I0X7 151 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 Q8N8P6 123 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 Q8N976 141 aa5.79□□□□□ -1.48
NUP88-211ENST00000575976 IBA57-AS1B1ANH7 110 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 UBE2L6O14933 153 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 TRGC2P03986 189 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 RAB5AP20339 215 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 IFI27P40305 119 aaPredicted RBP5.78□□□□□ -1.48
NUP88-211ENST00000575976 PKIAP61925 76 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 RBX1P62877 108 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 KIAA1109Q2LD37 5005 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 KLK12Q9UKR0 248 aa5.78□□□□□ -1.48
NUP88-211ENST00000575976 IGLV4-60A0A075B6I1 120 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 H7C423 109 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 K7EP13 123 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 FGF6P10767 208 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 MAJINQ3KP22 176 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 C10orf126Q8N4M7 172 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 PRSS3P2Q8NHM4 247 aa5.77□□□□□ -1.49
NUP88-211ENST00000575976 NXT2Q9NPJ8 142 aaKnown RBP5.77□□□□□ -1.49
NUP88-211ENST00000575976 A0A1B0GUV1 79 aa5.76□□□□□ -1.49
NUP88-211ENST00000575976 ANGP03950 147 aaKnown RBP5.76□□□□□ -1.49
NUP88-211ENST00000575976 C1orf134Q5TEV5 83 aa5.76□□□□□ -1.49
NUP88-211ENST00000575976 AMMECR1LQ6DCA0 310 aa5.76□□□□□ -1.49
NUP88-211ENST00000575976 RNASEKQ6P5S7 137 aaKnown RBP5.76□□□□□ -1.49
NUP88-211ENST00000575976 C6orf223Q8N319 242 aa5.76□□□□□ -1.49
NUP88-211ENST00000575976 C18orf32Q8TCD1 76 aa5.76□□□□□ -1.49
NUP88-211ENST00000575976 RPL39P62891 51 aaKnown RBP5.75□□□□□ -1.49
NUP88-211ENST00000575976 LAGE3Q14657 143 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 ENHOQ6UWT2 76 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 MRPL52Q86TS9 123 aaKnown RBP5.75□□□□□ -1.49
NUP88-211ENST00000575976 UBE2WQ96B02 151 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 URB1-AS1Q96HZ7 61 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 Q9HAA7 133 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
NUP88-211ENST00000575976 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
NUP88-211ENST00000575976 K7EMI3 77 aa5.74□□□□□ -1.49
NUP88-211ENST00000575976 RTL8CO15255 209 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms