RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 RPP21Q9H633 154 aaKnown RBP13.16□□□□□ -0.3
ABR-233ENST00000575934 K7EN84 100 aa13.15□□□□□ -0.3
ABR-233ENST00000575934 RNASE7Q9H1E1 156 aaKnown RBP13.15□□□□□ -0.3
ABR-233ENST00000575934 TWIST1Q15672 202 aa13.14□□□□□ -0.31
ABR-233ENST00000575934 OCC1Q8TAD7 63 aa13.14□□□□□ -0.31
ABR-233ENST00000575934 LRP1Q07954 4544 aaKnown RBP13.14□□□□□ -0.31
ABR-233ENST00000575934 COTL1Q14019 142 aa13.13□□□□□ -0.31
ABR-233ENST00000575934 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.13□□□□□ -0.31
ABR-233ENST00000575934 UBE2L6O14933 153 aa13.12□□□□□ -0.31
ABR-233ENST00000575934 AMTP48728 403 aa13.12□□□□□ -0.31
ABR-233ENST00000575934 CNBPP62633 177 aaKnown RBP13.12□□□□□ -0.31
ABR-233ENST00000575934 SDIM1Q6ZPB5 146 aa13.12□□□□□ -0.31
ABR-233ENST00000575934 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
ABR-233ENST00000575934 GTSF1Q8WW33 167 aa13.11□□□□□ -0.31
ABR-233ENST00000575934 TRAV26-2A0A0B4J265 109 aa13.1□□□□□ -0.31
ABR-233ENST00000575934 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
ABR-233ENST00000575934 PANO1I0J062 215 aa13.1□□□□□ -0.31
ABR-233ENST00000575934 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
ABR-233ENST00000575934 TMEM250H0YL14 139 aa13.09□□□□□ -0.31
ABR-233ENST00000575934 OXTP01178 125 aa13.09□□□□□ -0.31
ABR-233ENST00000575934 Q6ZNX1 250 aa13.09□□□□□ -0.31
ABR-233ENST00000575934 CIRBPQ14011 172 aaKnown RBP13.08□□□□□ -0.32
ABR-233ENST00000575934 SLPIP03973 132 aa13.07□□□□□ -0.32
ABR-233ENST00000575934 FAM231DQ6ZW35 169 aa13.07□□□□□ -0.32
ABR-233ENST00000575934 LYPD6BQ8NI32 183 aa13.07□□□□□ -0.32
ABR-233ENST00000575934 RPL39LQ96EH5 51 aaKnown RBP13.07□□□□□ -0.32
ABR-233ENST00000575934 FAT3Q8TDW7 4589 aa13.06□□□□□ -0.32
ABR-233ENST00000575934 NCR2O95944 276 aa13.06□□□□□ -0.32
ABR-233ENST00000575934 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
ABR-233ENST00000575934 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
ABR-233ENST00000575934 ALKAL2Q6UX46 152 aa13.06□□□□□ -0.32
ABR-233ENST00000575934 AP5S1Q9NUS5 200 aa13.06□□□□□ -0.32
ABR-233ENST00000575934 GATCO43716 136 aaKnown RBP13.05□□□□□ -0.32
ABR-233ENST00000575934 TEX261Q6UWH6 196 aa13.05□□□□□ -0.32
ABR-233ENST00000575934 SMIM15Q7Z3B0 74 aa13.05□□□□□ -0.32
ABR-233ENST00000575934 AKAP14Q86UN6 197 aa13.05□□□□□ -0.32
ABR-233ENST00000575934 PKHD1L1Q86WI1 4243 aa13.04□□□□□ -0.32
ABR-233ENST00000575934 IGHV3-64A0A075B6Q5 118 aa13.04□□□□□ -0.32
ABR-233ENST00000575934 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
ABR-233ENST00000575934 A8MWL6 223 aa13.04□□□□□ -0.32
ABR-233ENST00000575934 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
ABR-233ENST00000575934 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
ABR-233ENST00000575934 SDHAF1A6NFY7 115 aa13.03□□□□□ -0.32
ABR-233ENST00000575934 H7C423 109 aa13.03□□□□□ -0.32
ABR-233ENST00000575934 CT83Q5H943 113 aa13.03□□□□□ -0.32
ABR-233ENST00000575934 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.33
ABR-233ENST00000575934 APCSP02743 223 aa13.02□□□□□ -0.33
ABR-233ENST00000575934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.01□□□□□ -0.33
ABR-233ENST00000575934 IGKV3OR2-268A0A0C4DH90 116 aa13.01□□□□□ -0.33
ABR-233ENST00000575934 IGKV2-29A2NJV5 120 aaPredicted RBP13.01□□□□□ -0.33
ABR-233ENST00000575934 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
ABR-233ENST00000575934 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
ABR-233ENST00000575934 TRBV6-5A0A0K0K1A5 114 aa13□□□□□ -0.33
ABR-233ENST00000575934 FGF6P10767 208 aa13□□□□□ -0.33
ABR-233ENST00000575934 RNASEKQ6P5S7 137 aaKnown RBP13□□□□□ -0.33
ABR-233ENST00000575934 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
ABR-233ENST00000575934 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
ABR-233ENST00000575934 RNF185Q96GF1 192 aa13□□□□□ -0.33
ABR-233ENST00000575934 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
ABR-233ENST00000575934 CHTF8P0CG12 524 aa12.99□□□□□ -0.33
ABR-233ENST00000575934 CEBPGP53567 150 aa12.99□□□□□ -0.33
ABR-233ENST00000575934 SERTAD4-AS1Q5TG53 156 aa12.99□□□□□ -0.33
ABR-233ENST00000575934 A0A087WYN8 130 aa12.98□□□□□ -0.33
ABR-233ENST00000575934 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
ABR-233ENST00000575934 I3L3M4 83 aa12.98□□□□□ -0.33
ABR-233ENST00000575934 ZNF25P17030 456 aaPredicted RBP12.98□□□□□ -0.33
ABR-233ENST00000575934 LINC01551Q86U37 167 aa12.97□□□□□ -0.33
ABR-233ENST00000575934 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
ABR-233ENST00000575934 SMIM7Q9BQ49 75 aa12.97□□□□□ -0.33
ABR-233ENST00000575934 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
ABR-233ENST00000575934 GAS8-AS1O95177 125 aa12.96□□□□□ -0.33
ABR-233ENST00000575934 PMCHP20382 165 aa12.96□□□□□ -0.33
ABR-233ENST00000575934 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
ABR-233ENST00000575934 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.33
ABR-233ENST00000575934 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
ABR-233ENST00000575934 TMEM191AQ9H0A3 160 aa12.96□□□□□ -0.33
ABR-233ENST00000575934 GVQW2A0A096LPI5 108 aaPredicted RBP12.95□□□□□ -0.34
ABR-233ENST00000575934 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 HIGD1CA8MV81 97 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 TSHBP01222 138 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 ESDP10768 282 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 EIF5A2Q9GZV4 153 aaKnown RBP12.95□□□□□ -0.34
ABR-233ENST00000575934 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
ABR-233ENST00000575934 FOXI1Q12951 378 aa12.94□□□□□ -0.34
ABR-233ENST00000575934 DPH3Q96FX2 82 aa12.94□□□□□ -0.34
ABR-233ENST00000575934 FAM210AQ96ND0 272 aa12.94□□□□□ -0.34
ABR-233ENST00000575934 ST20Q9HBF5 79 aa12.94□□□□□ -0.34
ABR-233ENST00000575934 ZNF727A8MUV8 499 aa12.93□□□□□ -0.34
ABR-233ENST00000575934 POLR2KP53803 58 aaKnown RBP12.93□□□□□ -0.34
ABR-233ENST00000575934 COX6A2Q02221 97 aa12.93□□□□□ -0.34
ABR-233ENST00000575934 BTF3L4Q96K17 158 aa12.93□□□□□ -0.34
ABR-233ENST00000575934 TMEM242Q9NWH2 141 aa12.93□□□□□ -0.34
ABR-233ENST00000575934 SRP19P09132 144 aaKnown RBP12.92□□□□□ -0.34
ABR-233ENST00000575934 RAB4AP20338 218 aa12.92□□□□□ -0.34
ABR-233ENST00000575934 Q6ZRU5 148 aa12.92□□□□□ -0.34
ABR-233ENST00000575934 PRSS3P2Q8NHM4 247 aa12.92□□□□□ -0.34
ABR-233ENST00000575934 MRAP2Q96G30 205 aa12.92□□□□□ -0.34
ABR-233ENST00000575934 TMEM101Q96IK0 257 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms