RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 A0A1B0GUV1 79 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 J3QL48 77 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 PRSS1P07477 247 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 C20orf203Q8NBC4 194 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
RAB40B-208ENST00000573395 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
RAB40B-208ENST00000573395 DMBT1Q9UGM3 2413 aaPredicted RBP10.58□□□□□ -0.72
RAB40B-208ENST00000573395 A8MWL6 223 aa10.58□□□□□ -0.72
RAB40B-208ENST00000573395 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
RAB40B-208ENST00000573395 CLRN3Q8NCR9 226 aa10.58□□□□□ -0.72
RAB40B-208ENST00000573395 IGLV4-60A0A075B6I1 120 aa10.57□□□□□ -0.72
RAB40B-208ENST00000573395 AMMECR1LQ6DCA0 310 aa10.57□□□□□ -0.72
RAB40B-208ENST00000573395 TEX261Q6UWH6 196 aa10.57□□□□□ -0.72
RAB40B-208ENST00000573395 GTSF1Q8WW33 167 aa10.57□□□□□ -0.72
RAB40B-208ENST00000573395 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
RAB40B-208ENST00000573395 hDV102S1A0JD36 115 aa10.56□□□□□ -0.72
RAB40B-208ENST00000573395 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
RAB40B-208ENST00000573395 FAM231DQ6ZW35 169 aa10.56□□□□□ -0.72
RAB40B-208ENST00000573395 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
RAB40B-208ENST00000573395 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
RAB40B-208ENST00000573395 C9orf163Q8N9P6 203 aa10.55□□□□□ -0.72
RAB40B-208ENST00000573395 RPL39LQ96EH5 51 aaKnown RBP10.55□□□□□ -0.72
RAB40B-208ENST00000573395 SMIM7Q9BQ49 75 aa10.55□□□□□ -0.72
RAB40B-208ENST00000573395 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
RAB40B-208ENST00000573395 APCSP02743 223 aa10.54□□□□□ -0.72
RAB40B-208ENST00000573395 FAT1Q14517 4588 aa10.54□□□□□ -0.72
RAB40B-208ENST00000573395 CT83Q5H943 113 aa10.54□□□□□ -0.72
RAB40B-208ENST00000573395 RNASEKQ6P5S7 137 aaKnown RBP10.54□□□□□ -0.72
RAB40B-208ENST00000573395 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
RAB40B-208ENST00000573395 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
RAB40B-208ENST00000573395 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
RAB40B-208ENST00000573395 NCR2O95944 276 aa10.53□□□□□ -0.72
RAB40B-208ENST00000573395 FOXA3P55318 350 aaPredicted RBP10.53□□□□□ -0.72
RAB40B-208ENST00000573395 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
RAB40B-208ENST00000573395 ZNF727A8MUV8 499 aa10.52□□□□□ -0.73
RAB40B-208ENST00000573395 PMCHP20382 165 aa10.52□□□□□ -0.73
RAB40B-208ENST00000573395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.51□□□□□ -0.73
RAB40B-208ENST00000573395 IGKV2-29A2NJV5 120 aaPredicted RBP10.51□□□□□ -0.73
RAB40B-208ENST00000573395 CFAP161Q6P656 301 aa10.51□□□□□ -0.73
RAB40B-208ENST00000573395 DPH3Q96FX2 82 aa10.51□□□□□ -0.73
RAB40B-208ENST00000573395 FAM210AQ96ND0 272 aa10.51□□□□□ -0.73
RAB40B-208ENST00000573395 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 HIGD1CA8MV81 97 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 H7C423 109 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 I3L3M4 83 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
RAB40B-208ENST00000573395 CNBPP62633 177 aaKnown RBP10.5□□□□□ -0.73
RAB40B-208ENST00000573395 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 TSKUQ8WUA8 353 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 BTF3L4Q96K17 158 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 ST20Q9HBF5 79 aa10.5□□□□□ -0.73
RAB40B-208ENST00000573395 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
RAB40B-208ENST00000573395 NDUFS6O75380 124 aaKnown RBP10.49□□□□□ -0.73
RAB40B-208ENST00000573395 TMEM101Q96IK0 257 aa10.49□□□□□ -0.73
RAB40B-208ENST00000573395 FGF6P10767 208 aa10.48□□□□□ -0.73
RAB40B-208ENST00000573395 SDIM1Q6ZPB5 146 aa10.48□□□□□ -0.73
RAB40B-208ENST00000573395 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
RAB40B-208ENST00000573395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
RAB40B-208ENST00000573395 VPS13BQ7Z7G8 4022 aa10.47□□□□□ -0.73
RAB40B-208ENST00000573395 TRBV6-5A0A0K0K1A5 114 aa10.47□□□□□ -0.73
RAB40B-208ENST00000573395 FAM231BA6NCW3 169 aa10.47□□□□□ -0.73
RAB40B-208ENST00000573395 KRTAP29-1A8MX34 341 aaPredicted RBP10.47□□□□□ -0.73
RAB40B-208ENST00000573395 SRP19P09132 144 aaKnown RBP10.47□□□□□ -0.73
RAB40B-208ENST00000573395 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
RAB40B-208ENST00000573395 CHCHD10Q8WYQ3 142 aaPredicted RBP10.47□□□□□ -0.73
RAB40B-208ENST00000573395 TMEM191AQ9H0A3 160 aa10.47□□□□□ -0.73
RAB40B-208ENST00000573395 RIGQ13278 110 aa10.46□□□□□ -0.73
RAB40B-208ENST00000573395 MRAP2Q96G30 205 aa10.46□□□□□ -0.73
RAB40B-208ENST00000573395 TMEM241Q24JQ0 296 aa10.45□□□□□ -0.74
RAB40B-208ENST00000573395 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
RAB40B-208ENST00000573395 TMEM242Q9NWH2 141 aa10.45□□□□□ -0.74
RAB40B-208ENST00000573395 RAB4AP20338 218 aa10.44□□□□□ -0.74
RAB40B-208ENST00000573395 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
RAB40B-208ENST00000573395 FAM74A3Q4VXF1 159 aa10.44□□□□□ -0.74
RAB40B-208ENST00000573395 AMN1Q8IY45 258 aa10.44□□□□□ -0.74
RAB40B-208ENST00000573395 PANO1I0J062 215 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 GAS8-AS1O95177 125 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 TSHBP01222 138 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 FCER1GP30273 86 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
RAB40B-208ENST00000573395 ADIRFQ15847 76 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 C15orf56Q8N910 161 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 V9GYV3 84 aa10.43□□□□□ -0.74
RAB40B-208ENST00000573395 PPP1R17O96001 155 aa10.42□□□□□ -0.74
RAB40B-208ENST00000573395 SLPIP03973 132 aa10.42□□□□□ -0.74
RAB40B-208ENST00000573395 RPS10P46783 165 aaKnown RBP10.42□□□□□ -0.74
RAB40B-208ENST00000573395 XCL1P47992 114 aa10.42□□□□□ -0.74
RAB40B-208ENST00000573395 ISOC2Q96AB3 205 aa10.42□□□□□ -0.74
RAB40B-208ENST00000573395 RNF185Q96GF1 192 aa10.42□□□□□ -0.74
RAB40B-208ENST00000573395 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
RAB40B-208ENST00000573395 MYCBP2O75592 4640 aa10.41□□□□□ -0.74
RAB40B-208ENST00000573395 A0A1B0GVG6 124 aa10.41□□□□□ -0.74
RAB40B-208ENST00000573395 C7orf77A4D0Y5 90 aa10.41□□□□□ -0.74
RAB40B-208ENST00000573395 OXTP01178 125 aa10.41□□□□□ -0.74
RAB40B-208ENST00000573395 ESDP10768 282 aa10.41□□□□□ -0.74
RAB40B-208ENST00000573395 PEA15Q15121 130 aa10.41□□□□□ -0.74
RAB40B-208ENST00000573395 SS18Q15532 418 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms