RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 M0R2P5 195 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 M0R381 172 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 RASL10AQ92737 203 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 Q9H8V8 135 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 NXT2Q9NPJ8 142 aaKnown RBP6.28□□□□□ -1.4
NDE1-207ENST00000573203 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
NDE1-207ENST00000573203 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
NDE1-207ENST00000573203 H3BVH4 76 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 EVI2AP22794 236 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 CRYBA4P53673 196 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
NDE1-207ENST00000573203 FHL2Q14192 279 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 SPATA12Q7Z6I5 190 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 OR4C5Q8NGB2 326 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 ZNF479Q96JC4 524 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 C20orf78Q9BR46 151 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 DPH3P1Q9H4G8 78 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
NDE1-207ENST00000573203 TRAV4A0A0B4J268 109 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
NDE1-207ENST00000573203 TTC32Q5I0X7 151 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 RNASEKQ6P5S7 137 aaKnown RBP6.26□□□□□ -1.41
NDE1-207ENST00000573203 TEX43Q6ZNM6 134 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 FA2HQ7L5A8 372 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 SYT8Q8NBV8 401 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 AP1S3Q96PC3 154 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 UPK3BQ9BT76 320 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 MAP1LC3AQ9H492 121 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
NDE1-207ENST00000573203 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 MUC21A0A0G2JKD1 596 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 MUC21A0A140T8X8 626 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 LEPROTL1O95214 131 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 NPYP01303 97 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 C3orf79P0CE67 100 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 BTF3P20290 206 aaKnown RBP6.25□□□□□ -1.41
NDE1-207ENST00000573203 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
NDE1-207ENST00000573203 LINC00315P59091 139 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 PKIAP61925 76 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 Q8N8P6 123 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 NRACQ8N912 160 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 PKD1P98161 4303 aa6.25□□□□□ -1.41
NDE1-207ENST00000573203 LINC01549A6NIU2 74 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 GYPEP15421 78 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 ZNF876PQ49A33 203 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 PET117Q6UWS5 81 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 Q8N976 141 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
NDE1-207ENST00000573203 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 C20orf202A1L168 122 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 TSTD3H0UI37 97 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 K7EQD1 137 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 SIVA1O15304 175 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 SMIM17P0DL12 118 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 GATA1P15976 413 aaPredicted RBP6.23□□□□□ -1.41
NDE1-207ENST00000573203 G0S2P27469 103 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 FCER1GP30273 86 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 SSTP61278 116 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
NDE1-207ENST00000573203 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 A0A096LNJ9 63 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 SYS1-DBNDD2H3BUS1 97 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 RS1O15537 224 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 CIDEAO60543 219 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 HBDP02042 147 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 CRYGDP07320 174 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 KRTDAPP60985 99 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 ZNF664Q8N3J9 261 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 C14orf178Q8N769 122 aaPredicted RBP6.22□□□□□ -1.41
NDE1-207ENST00000573203 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
NDE1-207ENST00000573203 IGHV3-73A0A0B4J1V6 119 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 LOC100131303A0A0U1RQF7 123 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 A8MWV9 139 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 SMKR1H3BMG3 65 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
NDE1-207ENST00000573203 SH2D6Q7Z4S9 175 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 PRADC1Q9BSG0 188 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
NDE1-207ENST00000573203 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
NDE1-207ENST00000573203 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
NDE1-207ENST00000573203 TCAPO15273 167 aa6.2□□□□□ -1.42
NDE1-207ENST00000573203 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
NDE1-207ENST00000573203 NCR2O95944 276 aa6.2□□□□□ -1.42
NDE1-207ENST00000573203 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
NDE1-207ENST00000573203 LAGE3Q14657 143 aa6.2□□□□□ -1.42
NDE1-207ENST00000573203 RHOHQ15669 191 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms