RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 I3L3M4 83 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 MRPS12O15235 138 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 FCN3O75636 299 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 IGHG4P01861 327 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 CD7P09564 240 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 IFITM1P13164 125 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 RNASE4P34096 147 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 DIAPH2-AS1Q14236 149 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 MRPL23Q16540 153 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 C12orf74Q32Q52 190 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 LINC01620Q4KN68 170 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 ZFAND6Q6FIF0 208 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 LINC00322Q6ZN03 302 aaPredicted RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 C2orf91Q6ZV80 131 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 TEN1Q86WV5 123 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 DYNAPQ8N1N2 210 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 C5orf56Q8N8D9 126 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 Q8N9W7 124 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 LINC01560Q8TB33 94 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 TMEM101Q96IK0 257 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 DNAJC30Q96LL9 226 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 PRADC1Q9BSG0 188 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 TIMM21Q9BVV7 248 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 PPDPFQ9H3Y8 114 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 GEMIN7Q9H840 131 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 MRPL36Q9P0J6 103 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 ZNRD1Q9P1U0 126 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 TP53TG1Q9Y2A0 90 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 PKDREJQ9NTG1 2253 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 TLN1Q9Y490 2541 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
ERCC4-204ENST00000573018 RIF1Q5UIP0 2472 aaKnown RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 ANKRD11Q6UB99 2663 aaPredicted RBP1.94□□□□□ -2.1
ERCC4-204ENST00000573018 ZGRF1Q86YA3 2104 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 IGHV1OR15-1A0A075B7D0 117 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 A0A0B4J2C4 111 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 A0A0J9YX75 114 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 A0A0J9YXY3 114 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 TRBV6-5A0A0K0K1A5 114 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 TRBV27A0A0K0K1C4 114 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 SMKR1H3BMG3 65 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 H3BQ85 93 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 H3BT86 120 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 J3QQQ9 107 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 LGALS9O00182 355 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 UBE2L6O14933 153 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 LEPROTO15243 131 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 DNAL4O96015 105 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 INSP01308 110 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 IGHV3-23P01764 117 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 IGHG2P01859 326 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 ATP5G1P05496 136 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 LGALS1P09382 135 aaKnown RBP1.93□□□□□ -2.1
ERCC4-204ENST00000573018 ZNF688P0C7X2 276 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 INAFM2P0DMQ5 153 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 P0DMU3 169 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 FAM231AP0DMU4 169 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 FAM231CP0DMU5 169 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 CD28P10747 220 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 FGF6P10767 208 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 CRIP1P50238 77 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 ATP5J2P56134 94 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 CKS1BP61024 79 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 ERCC8Q13216 396 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 NSUN5P1Q3KNT7 163 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 S100A7L2Q5SY68 101 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 C11orf71Q6IPW1 123 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 LINC00173Q6ZV60 143 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 GPHB5Q86YW7 130 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 PCP2Q8IVA1 136 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 C10orf126Q8N4M7 172 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 C14orf178Q8N769 122 aaPredicted RBP1.93□□□□□ -2.1
ERCC4-204ENST00000573018 DYNLRB2Q8TF09 96 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 RNF185Q96GF1 192 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 CARD19Q96LW7 228 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 CITED1Q99966 193 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 ANAPC13Q9BS18 74 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 RHPN1-AS1Q9BWJ2 59 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 AGPAT4-IT1Q9H0P7 198 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 WNK2Q9Y3S1 2297 aa1.93□□□□□ -2.1
ERCC4-204ENST00000573018 ROS1P08922 2347 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 CACNA1BQ00975 2339 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 TRIOO75962 3097 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 POLEQ07864 2286 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV8-2A0A0B4J237 113 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV8-4A0A0B4J246 113 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV25A0A0B4J276 109 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 FAM240AA0A1B0GVK7 77 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 RBMY1BA6NDE4 496 aaKnown RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 RBMY1EA6NEQ0 496 aaKnown RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 LYNX1G3V0Z9 82 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 H3BMM0 161 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 H3BUX3 64 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 SLC25A20O43772 301 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 TIMM17BO60830 172 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 MSMBP08118 114 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 SPINK8P0C7L1 97 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 RBMY1DP0C7P1 496 aaKnown RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 RBMY1A1P0DJD3 496 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms