RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PRR34Q9NV39 138 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 V9GYH0 126 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 RAPGEF6Q8TEU7 1601 aa2.9□□□□□ -1.95
TOPBP1-210ENST00000572787 CASP8AP2Q9UKL3 1982 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 FREM3P0C091 2139 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 IGKV3-7A0A075B6H7 116 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 MYMXA0A1B0GTQ4 84 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 A0A1W2PNU3 283 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 IQCF6A8MYZ5 107 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 F8WEM9 126 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 SAA2P0DJI9 122 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 SFTA2Q6UW10 78 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 SMIM5Q71RC9 77 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 Q86TA4 180 aa2.89□□□□□ -1.95
TOPBP1-210ENST00000572787 EHBP1L1Q8N3D4 1523 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 TRBV6-8A0A0A6YYG3 113 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 A0A1B0GWA3 101 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 HMGN4O00479 90 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 SSBP1Q04837 148 aaKnown RBP2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 C6orf201Q7Z4U5 140 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 LRRC37A3O60309 1634 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 ASXL1Q8IXJ9 1541 aa2.88□□□□□ -1.95
TOPBP1-210ENST00000572787 ARFGEF2Q9Y6D5 1785 aa2.87□□□□□ -1.95
TOPBP1-210ENST00000572787 ABCA6Q8N139 1617 aa2.87□□□□□ -1.95
TOPBP1-210ENST00000572787 CLPSL1A2RUU4 121 aa2.87□□□□□ -1.95
TOPBP1-210ENST00000572787 COX8AP10176 69 aa2.87□□□□□ -1.95
TOPBP1-210ENST00000572787 PLGLAQ15195 96 aa2.87□□□□□ -1.95
TOPBP1-210ENST00000572787 COL4A5P29400 1685 aa2.87□□□□□ -1.95
TOPBP1-210ENST00000572787 BTAF1O14981 1849 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 MYOM1P52179 1685 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 KIAA2026Q5HYC2 2103 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 IGKV2D-24A0A075B6R9 120 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 IGLV3-32A0A0A0MS00 114 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 TRBV6-4A0A1B0GX49 114 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 CEBPZOSA8MTT3 80 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 DSCR10P59022 87 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 AMELXQ99217 191 aa2.86□□□□□ -1.95
TOPBP1-210ENST00000572787 EXPH5Q8NEV8 1989 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 ITSN1Q15811 1721 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 CUL9Q8IWT3 2517 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 AFDNP55196 1824 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 A0A0G2JQZ4 141 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 A8MU10 97 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 FXYD1O00168 92 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 PDE6GP18545 87 aa2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 RNF17Q9BXT8 1623 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-210ENST00000572787 ARHGAP32A7KAX9 2087 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 DIDO1Q9BTC0 2240 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 FAM223BA6NKX1 122 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 JMJD7-PLA2G4BH0Y9G9 81 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 PPP1R17O96001 155 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 PPYP01298 95 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 GCHFRP30047 84 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 SPAG11BQ08648 103 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 TPRXLQ17RH7 258 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 Q6JHZ5 121 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 SPAG11AQ6PDA7 123 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 PSENENQ9NZ42 101 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 KIF1AQ12756 1690 aa2.84□□□□□ -1.95
TOPBP1-210ENST00000572787 COL5A3P25940 1745 aaPredicted RBP2.84□□□□□ -1.96
TOPBP1-210ENST00000572787 SDK2Q58EX2 2172 aa2.84□□□□□ -1.96
TOPBP1-210ENST00000572787 PRR14LQ5THK1 2151 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 CCL3L1P16619 93 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 KRTAP10-11P60412 298 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 ATP5EP2Q5VTU8 51 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 ARL2-SNX15V9GYD0 113 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 PRXQ9BXM0 1461 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 NUMA1Q14980 2115 aa2.83□□□□□ -1.96
TOPBP1-210ENST00000572787 MAP2P11137 1827 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 IGLV3-1P01715 115 aa2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 ARMS2P0C7Q2 107 aa2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 FAM74A4Q5TZK3 123 aa2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 COX7B2Q8TF08 81 aa2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 NRXN2Q9P2S2 1712 aa2.82□□□□□ -1.96
TOPBP1-210ENST00000572787 HEATR5BQ9P2D3 2071 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 LEPROTL1O95214 131 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 DNAL4O96015 105 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 C10orf55Q5SWW7 151 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 SPINK14Q6IE38 97 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 SPACA4Q8TDM5 124 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 PPP1R1CQ8WVI7 109 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 KLK9Q9UKQ9 250 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 R4GMQ9 66 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 MRC1P22897 1456 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 NKTRP30414 1462 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 ARHGEF5Q12774 1597 aa2.81□□□□□ -1.96
TOPBP1-210ENST00000572787 PIK3C2BO00750 1634 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 TOP2AP11388 1531 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 SYCP2Q9BX26 1530 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 C10orf142B7Z368 130 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 IGKV1-17P01599 117 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 C3orf79P0CE67 100 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 TP53TG3Q9ULZ0 132 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 MYOFQ9NZM1 2061 aa2.8□□□□□ -1.96
TOPBP1-210ENST00000572787 D6R8Y8 96 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 IGLV6-57P01721 117 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 IFI27P40305 119 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms