RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 C9orf163Q8N9P6 203 aa10.66□□□□□ -0.7
RAB40B-205ENST00000571880 RPL39LQ96EH5 51 aaKnown RBP10.66□□□□□ -0.7
RAB40B-205ENST00000571880 SMIM12Q96EX1 92 aa10.66□□□□□ -0.7
RAB40B-205ENST00000571880 RPP21Q9H633 154 aaKnown RBP10.66□□□□□ -0.7
RAB40B-205ENST00000571880 NIT2Q9NQR4 276 aa10.66□□□□□ -0.7
RAB40B-205ENST00000571880 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
RAB40B-205ENST00000571880 COTL1Q14019 142 aa10.65□□□□□ -0.7
RAB40B-205ENST00000571880 SLC51BQ86UW2 128 aa10.65□□□□□ -0.7
RAB40B-205ENST00000571880 TCTE3Q8IZS6 198 aa10.65□□□□□ -0.7
RAB40B-205ENST00000571880 CHTF8P0CG12 524 aa10.64□□□□□ -0.71
RAB40B-205ENST00000571880 GATD1Q8NB37 220 aa10.64□□□□□ -0.71
RAB40B-205ENST00000571880 hCG_2014768A0A024R1R8 64 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 CEBPGP53567 150 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 Q6ZNX1 250 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 OCC1Q8TAD7 63 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 BIN3Q9NQY0 253 aa10.63□□□□□ -0.71
RAB40B-205ENST00000571880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.62□□□□□ -0.71
RAB40B-205ENST00000571880 IGKV2-29A2NJV5 120 aaPredicted RBP10.62□□□□□ -0.71
RAB40B-205ENST00000571880 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
RAB40B-205ENST00000571880 C9orf62Q8N4C0 152 aa10.62□□□□□ -0.71
RAB40B-205ENST00000571880 GTSF1Q8WW33 167 aa10.62□□□□□ -0.71
RAB40B-205ENST00000571880 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
RAB40B-205ENST00000571880 SLPIP03973 132 aa10.61□□□□□ -0.71
RAB40B-205ENST00000571880 HIGD2BQ4VC39 106 aa10.61□□□□□ -0.71
RAB40B-205ENST00000571880 WDR73Q6P4I2 378 aa10.61□□□□□ -0.71
RAB40B-205ENST00000571880 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
RAB40B-205ENST00000571880 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
RAB40B-205ENST00000571880 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
RAB40B-205ENST00000571880 CLRN3Q8NCR9 226 aa10.6□□□□□ -0.71
RAB40B-205ENST00000571880 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
RAB40B-205ENST00000571880 TRAV8-4A0A0B4J246 113 aa10.59□□□□□ -0.71
RAB40B-205ENST00000571880 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
RAB40B-205ENST00000571880 RNASEKQ6P5S7 137 aaKnown RBP10.59□□□□□ -0.71
RAB40B-205ENST00000571880 CNFNQ9BYD5 112 aa10.59□□□□□ -0.71
RAB40B-205ENST00000571880 IGHV3-64A0A075B6Q5 118 aa10.58□□□□□ -0.72
RAB40B-205ENST00000571880 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
RAB40B-205ENST00000571880 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
RAB40B-205ENST00000571880 APCSP02743 223 aa10.58□□□□□ -0.72
RAB40B-205ENST00000571880 CNBPP62633 177 aaKnown RBP10.58□□□□□ -0.72
RAB40B-205ENST00000571880 HMCN2Q8NDA2 5059 aa10.58□□□□□ -0.72
RAB40B-205ENST00000571880 DPH3Q96FX2 82 aa10.57□□□□□ -0.72
RAB40B-205ENST00000571880 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
RAB40B-205ENST00000571880 OXTP01178 125 aa10.56□□□□□ -0.72
RAB40B-205ENST00000571880 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
RAB40B-205ENST00000571880 SMIM15Q7Z3B0 74 aa10.56□□□□□ -0.72
RAB40B-205ENST00000571880 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
RAB40B-205ENST00000571880 CHCHD10Q8WYQ3 142 aaPredicted RBP10.56□□□□□ -0.72
RAB40B-205ENST00000571880 A0A087WYN8 130 aa10.55□□□□□ -0.72
RAB40B-205ENST00000571880 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
RAB40B-205ENST00000571880 FGF6P10767 208 aa10.55□□□□□ -0.72
RAB40B-205ENST00000571880 IGKV2-24A0A0C4DH68 120 aa10.54□□□□□ -0.72
RAB40B-205ENST00000571880 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
RAB40B-205ENST00000571880 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
RAB40B-205ENST00000571880 TMEM242Q9NWH2 141 aa10.54□□□□□ -0.72
RAB40B-205ENST00000571880 COX6A2Q02221 97 aa10.53□□□□□ -0.72
RAB40B-205ENST00000571880 LINC00526Q96FQ7 95 aa10.53□□□□□ -0.72
RAB40B-205ENST00000571880 A8MWL6 223 aa10.52□□□□□ -0.73
RAB40B-205ENST00000571880 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
RAB40B-205ENST00000571880 PMCHP20382 165 aa10.52□□□□□ -0.73
RAB40B-205ENST00000571880 XCL1P47992 114 aa10.52□□□□□ -0.73
RAB40B-205ENST00000571880 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
RAB40B-205ENST00000571880 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
RAB40B-205ENST00000571880 NCR2O95944 276 aa10.51□□□□□ -0.73
RAB40B-205ENST00000571880 RPS10P46783 165 aaKnown RBP10.51□□□□□ -0.73
RAB40B-205ENST00000571880 FAM231DQ6ZW35 169 aa10.51□□□□□ -0.73
RAB40B-205ENST00000571880 PRSS3P2Q8NHM4 247 aa10.51□□□□□ -0.73
RAB40B-205ENST00000571880 BORCS7Q96B45 105 aa10.51□□□□□ -0.73
RAB40B-205ENST00000571880 FAM231BA6NCW3 169 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 PHOX2AO14813 284 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 TSHBP01222 138 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 FOXI1Q12951 378 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 SERTAD4-AS1Q5TG53 156 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 EIF5A2Q9GZV4 153 aaKnown RBP10.5□□□□□ -0.73
RAB40B-205ENST00000571880 PLA2G2DQ9UNK4 145 aa10.5□□□□□ -0.73
RAB40B-205ENST00000571880 HIGD1CA8MV81 97 aa10.49□□□□□ -0.73
RAB40B-205ENST00000571880 I3L3M4 83 aa10.49□□□□□ -0.73
RAB40B-205ENST00000571880 CCL25O15444 150 aa10.49□□□□□ -0.73
RAB40B-205ENST00000571880 CFAP161Q6P656 301 aa10.49□□□□□ -0.73
RAB40B-205ENST00000571880 AMN1Q8IY45 258 aa10.49□□□□□ -0.73
RAB40B-205ENST00000571880 ST20Q9HBF5 79 aa10.49□□□□□ -0.73
RAB40B-205ENST00000571880 GVQW2A0A096LPI5 108 aaPredicted RBP10.48□□□□□ -0.73
RAB40B-205ENST00000571880 LINC01551Q86U37 167 aa10.48□□□□□ -0.73
RAB40B-205ENST00000571880 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
RAB40B-205ENST00000571880 LYPD6BQ8NI32 183 aa10.48□□□□□ -0.73
RAB40B-205ENST00000571880 RNF185Q96GF1 192 aa10.48□□□□□ -0.73
RAB40B-205ENST00000571880 BTF3L4Q96K17 158 aa10.48□□□□□ -0.73
RAB40B-205ENST00000571880 A0A096LNI7 61 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 ZNF727A8MUV8 499 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 CT83Q5H943 113 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 TEX261Q6UWH6 196 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 MRAP2Q96G30 205 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 PLAC8Q9NZF1 115 aa10.47□□□□□ -0.73
RAB40B-205ENST00000571880 TRBV6-5A0A0K0K1A5 114 aa10.46□□□□□ -0.73
RAB40B-205ENST00000571880 LINC00959A0A1B0GUT2 108 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms