RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 FAM74A4Q5TZK3 123 aa14.33□□□□□ -0.12
SPNS2-203ENST00000570979 STHQ8IWL8 128 aa14.33□□□□□ -0.12
SPNS2-203ENST00000570979 FAM110AQ9BQ89 295 aa14.33□□□□□ -0.12
SPNS2-203ENST00000570979 RHODO00212 210 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 NMUP48645 174 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 ZFP2Q6ZN57 461 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 NEXN-AS1Q8NBZ9 246 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 LINC01587Q99440 93 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 TIMM17AQ99595 171 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 CITED2Q99967 270 aaPredicted RBP14.32□□□□□ -0.12
SPNS2-203ENST00000570979 JPT2Q9H910 190 aa14.32□□□□□ -0.12
SPNS2-203ENST00000570979 MRPL35Q9NZE8 188 aaKnown RBP14.32□□□□□ -0.12
SPNS2-203ENST00000570979 PRKDCP78527 4128 aaKnown RBP14.31□□□□□ -0.12
SPNS2-203ENST00000570979 ADARB2-AS1A8MUL3 147 aa14.31□□□□□ -0.12
SPNS2-203ENST00000570979 NSUN5P1Q3KNT7 163 aa14.31□□□□□ -0.12
SPNS2-203ENST00000570979 MRPL16Q9NX20 251 aaKnown RBP14.31□□□□□ -0.12
SPNS2-203ENST00000570979 ZC2HC1BQ5TFG8 222 aa14.3□□□□□ -0.12
SPNS2-203ENST00000570979 ATP6V0E2Q8NHE4 81 aa14.29□□□□□ -0.12
SPNS2-203ENST00000570979 A0A1W2PRX2 142 aa14.29□□□□□ -0.12
SPNS2-203ENST00000570979 I3L3M4 83 aa14.29□□□□□ -0.12
SPNS2-203ENST00000570979 OR11H2Q8NH07 326 aa14.29□□□□□ -0.12
SPNS2-203ENST00000570979 NOTCH3Q9UM47 2321 aa14.28□□□□□ -0.12
SPNS2-203ENST00000570979 E9PLD3 99 aa14.28□□□□□ -0.12
SPNS2-203ENST00000570979 TAL2Q16559 108 aa14.28□□□□□ -0.12
SPNS2-203ENST00000570979 RBMY1BA6NDE4 496 aaKnown RBP14.27□□□□□ -0.12
SPNS2-203ENST00000570979 RBMY1EA6NEQ0 496 aaKnown RBP14.27□□□□□ -0.12
SPNS2-203ENST00000570979 RBMY1DP0C7P1 496 aaKnown RBP14.27□□□□□ -0.12
SPNS2-203ENST00000570979 CRYBA4P53673 196 aa14.27□□□□□ -0.12
SPNS2-203ENST00000570979 PHLDA1Q8WV24 401 aaPredicted RBP14.27□□□□□ -0.12
SPNS2-203ENST00000570979 BAALCQ8WXS3 180 aa14.27□□□□□ -0.12
SPNS2-203ENST00000570979 TM2D2Q9BX73 214 aa14.27□□□□□ -0.12
SPNS2-203ENST00000570979 TGP01266 2768 aa14.27□□□□□ -0.12
SPNS2-203ENST00000570979 TSPAN13O95857 204 aa14.27□□□□□ -0.13
SPNS2-203ENST00000570979 DNAJC30Q96LL9 226 aa14.27□□□□□ -0.13
SPNS2-203ENST00000570979 AGRNO00468 2067 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 TRAV26-1A0A087WT03 109 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
SPNS2-203ENST00000570979 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 PMVKQ15126 192 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
SPNS2-203ENST00000570979 ODF3L2Q3SX64 289 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 NDUFA11Q86Y39 141 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 TP53TG1Q9Y2A0 90 aa14.26□□□□□ -0.13
SPNS2-203ENST00000570979 HTN1P15515 57 aa14.25□□□□□ -0.13
SPNS2-203ENST00000570979 PRSS29PA6NIE9 313 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 IGIPA6NJ69 53 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 BEAN1Q3B7T3 259 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 GTSCR1Q86UQ5 136 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 VCX2Q9H322 139 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 GEMIN7Q9H840 131 aaKnown RBP14.24□□□□□ -0.13
SPNS2-203ENST00000570979 HERVK_113P61574 105 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 RAB37Q96AX2 223 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 C1QTNF4Q9BXJ3 329 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 TNFRSF18Q9Y5U5 241 aa14.24□□□□□ -0.13
SPNS2-203ENST00000570979 IGLV1-51P01701 117 aa14.22□□□□□ -0.13
SPNS2-203ENST00000570979 PCP2Q8IVA1 136 aa14.22□□□□□ -0.13
SPNS2-203ENST00000570979 SORL1Q92673 2214 aa14.22□□□□□ -0.13
SPNS2-203ENST00000570979 PRB2P02812 416 aaPredicted RBP14.21□□□□□ -0.13
SPNS2-203ENST00000570979 MORN3Q6PF18 240 aaPredicted RBP14.21□□□□□ -0.13
SPNS2-203ENST00000570979 C11orf72Q8NBR9 251 aa14.21□□□□□ -0.13
SPNS2-203ENST00000570979 OXLD1Q5BKU9 147 aa14.2□□□□□ -0.14
SPNS2-203ENST00000570979 C20orf203Q8NBC4 194 aa14.2□□□□□ -0.14
SPNS2-203ENST00000570979 RS1O15537 224 aa14.19□□□□□ -0.14
SPNS2-203ENST00000570979 KPRPQ5T749 579 aaPredicted RBP14.19□□□□□ -0.14
SPNS2-203ENST00000570979 NAA38Q9BRA0 125 aaKnown RBP14.19□□□□□ -0.14
SPNS2-203ENST00000570979 CHAC1Q9BUX1 264 aa14.19□□□□□ -0.14
SPNS2-203ENST00000570979 CFAP126Q5VTH2 177 aa14.19□□□□□ -0.14
SPNS2-203ENST00000570979 XCL2Q9UBD3 114 aa14.19□□□□□ -0.14
SPNS2-203ENST00000570979 PYGO1Q9Y3Y4 419 aa14.19□□□□□ -0.14
SPNS2-203ENST00000570979 IGKV2D-26A0A0A0MRZ7 120 aa14.18□□□□□ -0.14
SPNS2-203ENST00000570979 TSHBP01222 138 aa14.18□□□□□ -0.14
SPNS2-203ENST00000570979 IGHV3-53P01767 116 aa14.18□□□□□ -0.14
SPNS2-203ENST00000570979 CEND1Q8N111 149 aa14.18□□□□□ -0.14
SPNS2-203ENST00000570979 PRO0461Q9UI25 63 aa14.18□□□□□ -0.14
SPNS2-203ENST00000570979 TRBV25-1A0A075B6N4 114 aa14.17□□□□□ -0.14
SPNS2-203ENST00000570979 IGLL5B9A064 214 aa14.17□□□□□ -0.14
SPNS2-203ENST00000570979 FXYD2P54710 66 aa14.17□□□□□ -0.14
SPNS2-203ENST00000570979 GCSHP23434 173 aa14.17□□□□□ -0.14
SPNS2-203ENST00000570979 GAGE13Q4V321 117 aa14.17□□□□□ -0.14
SPNS2-203ENST00000570979 TMEM263Q8WUH6 116 aaKnown RBP14.17□□□□□ -0.14
SPNS2-203ENST00000570979 ZNF479Q96JC4 524 aa14.17□□□□□ -0.14
SPNS2-203ENST00000570979 DNAH3Q8TD57 4116 aa14.16□□□□□ -0.14
SPNS2-203ENST00000570979 A0A1B0GWB2 263 aa14.16□□□□□ -0.14
SPNS2-203ENST00000570979 WFDC2Q14508 124 aa14.16□□□□□ -0.14
SPNS2-203ENST00000570979 MYMXA0A1B0GTQ4 84 aa14.15□□□□□ -0.14
SPNS2-203ENST00000570979 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
SPNS2-203ENST00000570979 ERG28Q9UKR5 140 aa14.15□□□□□ -0.14
SPNS2-203ENST00000570979 C1orf158Q8N1D5 194 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 H3BMG7 143 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 PF4P02776 101 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 INSL3P51460 131 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 TCTAP57738 103 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 RPL39P62891 51 aaKnown RBP14.14□□□□□ -0.15
SPNS2-203ENST00000570979 WFDC9Q8NEX5 89 aa14.14□□□□□ -0.15
SPNS2-203ENST00000570979 NFE4Q86UQ8 179 aa14.13□□□□□ -0.15
SPNS2-203ENST00000570979 IL17DQ8TAD2 202 aa14.13□□□□□ -0.15
SPNS2-203ENST00000570979 TRBV10-1A0A0K0K1A3 114 aa14.12□□□□□ -0.15
SPNS2-203ENST00000570979 P0DMU3 169 aa14.12□□□□□ -0.15
SPNS2-203ENST00000570979 FAM231AP0DMU4 169 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms