RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
CTDNEP1-202ENST00000570380 CARD19Q96LW7 228 aa6.26□□□□□ -1.41
CTDNEP1-202ENST00000570380 H0Y9J4 135 aa6.25□□□□□ -1.41
CTDNEP1-202ENST00000570380 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
CTDNEP1-202ENST00000570380 GAGE2BQ13066 116 aa6.25□□□□□ -1.41
CTDNEP1-202ENST00000570380 PSMG3Q9BT73 122 aaPredicted RBP6.25□□□□□ -1.41
CTDNEP1-202ENST00000570380 ZFP30Q9Y2G7 519 aa6.25□□□□□ -1.41
CTDNEP1-202ENST00000570380 BORCS7-ASMTA0A0B4J1R7 106 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 M0QY20 66 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 CXorf1O96002 111 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 SSTP61278 116 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 FOXI1Q12951 378 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 ZNF726P1Q15940 193 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 KCNRGQ8N5I3 272 aa6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 SSBP4Q9BWG4 385 aaPredicted RBP6.24□□□□□ -1.41
CTDNEP1-202ENST00000570380 HMSDA8MTL9 139 aa6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 UBE2L6O14933 153 aa6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 SNAI2O43623 268 aa6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 NKX2-5P52952 324 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 ZNF345Q14585 488 aa6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 SPANXN1Q5VSR9 72 aa6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 PHF5AQ7RTV0 110 aaKnown RBP6.23□□□□□ -1.41
CTDNEP1-202ENST00000570380 TRAV1-1A0A0B4J248 108 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 LOC107984640A0A0U1RRK4 108 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 BCL2L11O43521 198 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 TSPAN13O95857 204 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 SMIM17P0DL12 118 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 UBE2G2P60604 165 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 SERF2P84101 59 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 SYCNQ0VAF6 134 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 SUMO4Q6EEV6 95 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 TCTE3Q8IZS6 198 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 HIST1H2BAQ96A08 127 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
CTDNEP1-202ENST00000570380 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 LTAP01374 205 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 MBP02144 154 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 MGPP08493 103 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 CXCL1P09341 107 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 OR5AL1P0C617 328 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 UBE2D1P51668 147 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 TMUB2Q71RG4 321 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 FMC1Q96HJ9 113 aa6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 ACTR3CQ9C0K3 210 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-202ENST00000570380 FAM74A7A6NL05 159 aa6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 BCL2P10415 239 aa6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 RPL13AP40429 203 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 FHITP49789 147 aa6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 UBE2G1P62253 170 aa6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 AKR1C8PQ5T2L2 129 aa6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
CTDNEP1-202ENST00000570380 CTXND1A0A1B0GTU2 59 aa6.19□□□□□ -1.42
CTDNEP1-202ENST00000570380 KANTRA0A1W2PQU2 76 aa6.19□□□□□ -1.42
CTDNEP1-202ENST00000570380 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
CTDNEP1-202ENST00000570380 XCL1P47992 114 aa6.19□□□□□ -1.42
CTDNEP1-202ENST00000570380 EIF5AP63241 154 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-202ENST00000570380 RASL11AQ6T310 242 aa6.19□□□□□ -1.42
CTDNEP1-202ENST00000570380 A0A087WZ39 114 aa6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 MAP1LC3B2A6NCE7 125 aa6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 FGF6P10767 208 aa6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 COTL1Q14019 142 aa6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 NKX6-2Q9C056 277 aaPredicted RBP6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 MAP1LC3BQ9GZQ8 125 aa6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 NIT2Q9NQR4 276 aa6.18□□□□□ -1.42
CTDNEP1-202ENST00000570380 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 A0A1B0GV50 99 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 CCL25O15444 150 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 CAMPP49913 170 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 AMMECR1LQ6DCA0 310 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 RNASEKQ6P5S7 137 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 STOML3Q8TAV4 291 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 FAM213BQ8TBF2 198 aa6.17□□□□□ -1.42
CTDNEP1-202ENST00000570380 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
CTDNEP1-202ENST00000570380 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-202ENST00000570380 MEF2BQ02080 365 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-202ENST00000570380 C9orf62Q8N4C0 152 aa6.16□□□□□ -1.42
CTDNEP1-202ENST00000570380 OR5A1Q8NGJ0 315 aa6.16□□□□□ -1.42
CTDNEP1-202ENST00000570380 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
CTDNEP1-202ENST00000570380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-202ENST00000570380 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-202ENST00000570380 APOMO95445 188 aa6.15□□□□□ -1.42
CTDNEP1-202ENST00000570380 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-202ENST00000570380 ISOC2Q96AB3 205 aa6.15□□□□□ -1.42
CTDNEP1-202ENST00000570380 MLST8Q9BVC4 326 aa6.15□□□□□ -1.42
CTDNEP1-202ENST00000570380 UMAD1C9J7I0 102 aa6.14□□□□□ -1.43
CTDNEP1-202ENST00000570380 NTF3P20783 257 aa6.14□□□□□ -1.43
CTDNEP1-202ENST00000570380 AKR1C3P42330 323 aa6.14□□□□□ -1.43
CTDNEP1-202ENST00000570380 SFT2D1Q8WV19 159 aa6.14□□□□□ -1.43
CTDNEP1-202ENST00000570380 MBD3L1Q8WWY6 194 aa6.14□□□□□ -1.43
CTDNEP1-202ENST00000570380 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
CTDNEP1-202ENST00000570380 FAM168BA1KXE4 195 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 H7C423 109 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 PAGE4O60829 102 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 LINC01547P58512 204 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 CCL20P78556 96 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 NDUFA5Q16718 116 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 CD164L2Q6UWJ8 174 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms