RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SNAI2O43623 268 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 SIX6O95475 246 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 GAGE2BQ13066 116 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 AMMECR1LQ6DCA0 310 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 MZT2BQ6NZ67 158 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 PSMG3Q9BT73 122 aaPredicted RBP5.24□□□□□ -1.57
SMG1-216ENST00000569122 MLST8Q9BVC4 326 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 TNFSF18Q9UNG2 199 aa5.24□□□□□ -1.57
SMG1-216ENST00000569122 CARHSP1Q9Y2V2 147 aaKnown RBP5.24□□□□□ -1.57
SMG1-216ENST00000569122 H7C423 109 aa5.23□□□□□ -1.57
SMG1-216ENST00000569122 MPC2O95563 127 aa5.23□□□□□ -1.57
SMG1-216ENST00000569122 LTAP01374 205 aa5.23□□□□□ -1.57
SMG1-216ENST00000569122 ATP6V0CP27449 155 aa5.23□□□□□ -1.57
SMG1-216ENST00000569122 A0A1W2PNN7 141 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 S100A9P06702 114 aaKnown RBP5.22□□□□□ -1.57
SMG1-216ENST00000569122 MGPP08493 103 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 NKX2-5P52952 324 aaPredicted RBP5.22□□□□□ -1.57
SMG1-216ENST00000569122 FOXI1Q12951 378 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
SMG1-216ENST00000569122 RASL11AQ6T310 242 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 WFDC1Q9HC57 220 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 NIT2Q9NQR4 276 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
SMG1-216ENST00000569122 IGLV4-69A0A075B6H9 119 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 A0A087WZ39 114 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 FAM74A7A6NL05 159 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 APOMO95445 188 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 CAMPP49913 170 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 UBE2G2P60604 165 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 SSTP61278 116 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 RNASEKQ6P5S7 137 aaKnown RBP5.21□□□□□ -1.58
SMG1-216ENST00000569122 BTF3L4Q96K17 158 aa5.21□□□□□ -1.58
SMG1-216ENST00000569122 NCR2O95944 276 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 ZNF25P17030 456 aaPredicted RBP5.2□□□□□ -1.58
SMG1-216ENST00000569122 AKR1C3P42330 323 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 XCL1P47992 114 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 FHITP49789 147 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 SS18Q15532 418 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 EIF5AL1Q6IS14 154 aaKnown RBP5.2□□□□□ -1.58
SMG1-216ENST00000569122 OR5A1Q8NGJ0 315 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 STOML3Q8TAV4 291 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 TMEM101Q96IK0 257 aa5.2□□□□□ -1.58
SMG1-216ENST00000569122 MUC21A0A140T8X8 626 aa5.19□□□□□ -1.58
SMG1-216ENST00000569122 CTXND1A0A1B0GTU2 59 aa5.19□□□□□ -1.58
SMG1-216ENST00000569122 H2BFSP57053 126 aa5.19□□□□□ -1.58
SMG1-216ENST00000569122 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
SMG1-216ENST00000569122 PHF5AQ7RTV0 110 aaKnown RBP5.19□□□□□ -1.58
SMG1-216ENST00000569122 CDIP1Q9H305 208 aa5.19□□□□□ -1.58
SMG1-216ENST00000569122 CCL25O15444 150 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 TSPAN13O95857 204 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 KRTAP1-4P0C5Y4 121 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 TRGC1P0CF51 173 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 MALP21145 153 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 CD164L2Q6UWJ8 174 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 LINC00526Q96FQ7 95 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 FAM210AQ96ND0 272 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 CAMK2N2Q96S95 79 aa5.18□□□□□ -1.58
SMG1-216ENST00000569122 LINC00959A0A1B0GUT2 108 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 F2Z2F3 143 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 SSNA1O43805 119 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 RPS20P60866 119 aaKnown RBP5.17□□□□□ -1.58
SMG1-216ENST00000569122 RPL18AQ02543 176 aaKnown RBP5.17□□□□□ -1.58
SMG1-216ENST00000569122 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 CST9LP1Q5W188 147 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 BAGE2Q86Y30 109 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 NUP35Q8NFH5 326 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 ENKURQ8TC29 256 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 C2orf48Q96LS8 159 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 TPPP3Q9BW30 176 aa5.17□□□□□ -1.58
SMG1-216ENST00000569122 XKRY2A2RUG3 117 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 APCSP02743 223 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 BCL2P10415 239 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 ESDP10768 282 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 NTF3P20783 257 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 OR2D3Q8NGH3 330 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 IMMP2LQ96T52 175 aa5.16□□□□□ -1.58
SMG1-216ENST00000569122 BORCS7-ASMTA0A0B4J1R7 106 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 C19orf71A6NCJ1 209 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 INMT-MINDY4F8WBC2 141 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 F8WDY8 70 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.15□□□□□ -1.59
SMG1-216ENST00000569122 DEFA3P59666 94 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 MEF2BQ02080 365 aaPredicted RBP5.15□□□□□ -1.59
SMG1-216ENST00000569122 TPRXLQ17RH7 258 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 AKR1C8PQ5T2L2 129 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
SMG1-216ENST00000569122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.14□□□□□ -1.59
SMG1-216ENST00000569122 IGKV2-29A2NJV5 120 aaPredicted RBP5.14□□□□□ -1.59
SMG1-216ENST00000569122 C1orf196B1AJZ1 125 aa5.14□□□□□ -1.59
SMG1-216ENST00000569122 COX7A2LO14548 114 aa5.14□□□□□ -1.59
SMG1-216ENST00000569122 UBE2BP63146 152 aa5.14□□□□□ -1.59
SMG1-216ENST00000569122 TEX261Q6UWH6 196 aa5.14□□□□□ -1.59
SMG1-216ENST00000569122 MAP1LC3B2A6NCE7 125 aa5.13□□□□□ -1.59
SMG1-216ENST00000569122 BCL2L11O43521 198 aa5.13□□□□□ -1.59
SMG1-216ENST00000569122 PFDN1O60925 122 aa5.13□□□□□ -1.59
SMG1-216ENST00000569122 CTAG1AP78358 180 aa5.13□□□□□ -1.59
SMG1-216ENST00000569122 SMAGPQ0VAQ4 97 aa5.13□□□□□ -1.59
SMG1-216ENST00000569122 ZNF726P1Q15940 193 aa5.13□□□□□ -1.59
SMG1-216ENST00000569122 MAP1LC3BQ9GZQ8 125 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms