RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PKIAP61925 76 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 RBX1P62877 108 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 CYCSP99999 105 aaKnown RBP3.45□□□□□ -1.86
CDH13-211ENST00000568770 FLI1Q01543 452 aaPredicted RBP3.45□□□□□ -1.86
CDH13-211ENST00000568770 REG3AQ06141 175 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 NTM-AS1Q6ZSK4 140 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 Q8NBF4 154 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 SEC22CQ9BRL7 303 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 A0A1W2PPV4 95 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 GRIFINA4D1Z8 144 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 FAM231BA6NCW3 169 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 FABP5P3A8MUU1 101 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 B4DEV8 164 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 KRBOX1C9JBD0 128 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 H7C1H1 209 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 M0R381 172 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 NOL3O60936 208 aaKnown RBP3.44□□□□□ -1.86
CDH13-211ENST00000568770 ARL14EPLP0DKL9 152 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 CNPY1Q3B7I2 92 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 SAPCD1Q5SSQ6 148 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 DNLZQ5SXM8 178 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 C5orf17Q8NAS9 161 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 VAX2Q9UIW0 290 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 PHLDA3Q9Y5J5 127 aa3.44□□□□□ -1.86
CDH13-211ENST00000568770 A0A096LNI7 61 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 TRAV8-4A0A0B4J246 113 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 M0R036 132 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 NDUFS6O75380 124 aaKnown RBP3.43□□□□□ -1.86
CDH13-211ENST00000568770 IFNA7P01567 189 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 P01737 135 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 TPT1P13693 172 aaKnown RBP3.43□□□□□ -1.86
CDH13-211ENST00000568770 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
CDH13-211ENST00000568770 RAB4BP61018 213 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 RAB2AP61019 212 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 ZNF56Q15929 161 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 LRRC37A5PQ49AS3 106 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 C15orf56Q8N910 161 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.43□□□□□ -1.86
CDH13-211ENST00000568770 SCGB1C1Q8TD33 95 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 SDHCQ99643 169 aaPredicted RBP3.43□□□□□ -1.86
CDH13-211ENST00000568770 DERL1Q9BUN8 251 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 NUDT15Q9NV35 164 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 EPDR1Q9UM22 224 aa3.43□□□□□ -1.86
CDH13-211ENST00000568770 TRBV25-1A0A075B6N4 114 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 TMSB15BA0A087X1C1 80 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 TRBV6-1A0A0K0K1D8 114 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 PLA2G10O15496 165 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 SIX6O95475 246 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 GZMBP10144 247 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 IL7P13232 177 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 RPS10P46783 165 aaKnown RBP3.42□□□□□ -1.86
CDH13-211ENST00000568770 CRIP1P50238 77 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 TMEM97Q5BJF2 176 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 ZFP82Q8N141 532 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 ZNF664Q8N3J9 261 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 C20orf203Q8NBC4 194 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 SMIM3Q9BZL3 60 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 ARL2-SNX15V9GYD0 113 aa3.42□□□□□ -1.86
CDH13-211ENST00000568770 IGLV4-60A0A075B6I1 120 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 TRAV26-2A0A0B4J265 109 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 LYRM1O43325 122 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 SH2D1AO60880 128 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 GCHFRP30047 84 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 CACNG7P62955 275 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 PRR4Q16378 134 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
CDH13-211ENST00000568770 IGHV1-24A0A0C4DH33 117 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 CDC34P49427 236 aaPredicted RBP3.4□□□□□ -1.87
CDH13-211ENST00000568770 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 IQCJQ1A5X6 159 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 FAM162BQ5T6X4 162 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 Q6ZVQ6 151 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 Q86TA4 180 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 INO80EQ8NBZ0 244 aaPredicted RBP3.4□□□□□ -1.87
CDH13-211ENST00000568770 AQP10Q96PS8 301 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 WFDC1Q9HC57 220 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 LINC00474Q9P2X8 69 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 PSORS1C2Q9UIG4 136 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
CDH13-211ENST00000568770 IGKV3OR2-268A0A0C4DH90 116 aa3.39□□□□□ -1.87
CDH13-211ENST00000568770 CCDC160A6NGH7 325 aa3.39□□□□□ -1.87
CDH13-211ENST00000568770 RPL12P30050 165 aaKnown RBP3.39□□□□□ -1.87
CDH13-211ENST00000568770 DEFA3P59666 94 aa3.39□□□□□ -1.87
CDH13-211ENST00000568770 ZNF674Q2M3X9 581 aa3.39□□□□□ -1.87
CDH13-211ENST00000568770 OR10AG1Q8NH19 301 aa3.39□□□□□ -1.87
CDH13-211ENST00000568770 TMEM167BQ9NRX6 74 aa3.39□□□□□ -1.87
CDH13-211ENST00000568770 GVQW2A0A096LPI5 108 aaPredicted RBP3.38□□□□□ -1.87
CDH13-211ENST00000568770 MUC21A0A140T8X8 626 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 A0A1W2PRE2 83 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 PEX7O00628 323 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 CXorf1O96002 111 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 SULT1A2P50226 295 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 H2BFSP57053 126 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 SSTP61278 116 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 PPP1R1CQ8WVI7 109 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 TMEM243Q9BU79 118 aa3.38□□□□□ -1.87
CDH13-211ENST00000568770 ZNF471Q9BX82 626 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms