RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 SUMO2P61956 95 aaKnown RBP4.53□□□□□ -1.68
PTPN9-205ENST00000568108 RPL32P62910 135 aaKnown RBP4.53□□□□□ -1.68
PTPN9-205ENST00000568108 LINC00173Q6ZV60 143 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 ZNF575Q86XF7 245 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 UBE2DNLQ8IWF7 75 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 LINC00469Q8N7U9 141 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 NRACQ8N912 160 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 C1QTNF4Q9BXJ3 329 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 XCL2Q9UBD3 114 aa4.53□□□□□ -1.68
PTPN9-205ENST00000568108 IGHV1OR15-1A0A075B7D0 117 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 TRAV12-3A0A0B4J271 114 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 H7C1H1 209 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 SIVA1O15304 175 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 DLEU1O43261 78 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 DPM2O94777 84 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 SPART-AS1P0CW21 52 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
PTPN9-205ENST00000568108 HLA-DRB4P13762 266 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 PLNP26678 52 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 EMP1P54849 157 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 MAJINQ3KP22 176 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 TMEM97Q5BJF2 176 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 Q6ZR54 194 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 C14orf178Q8N769 122 aaPredicted RBP4.52□□□□□ -1.69
PTPN9-205ENST00000568108 HLA-DRB4X5D2U9 266 aa4.52□□□□□ -1.69
PTPN9-205ENST00000568108 TRAV12-1A0A0B4J245 112 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 IGHV3-16A0A0C4DH30 117 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 H3BMM0 161 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 VCYO14598 125 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 IGKCP01834 107 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 MALP21145 153 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 GAGE1Q13065 139 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 PAPPA-AS1Q5QFB9 102 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 PIK3CD-AS1Q5SR53 167 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 C1orf134Q5TEV5 83 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 C18orf15Q96N68 181 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 KIR2DL4Q99706 377 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
PTPN9-205ENST00000568108 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 IGHV3OR16-12A0A075B7B8 117 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 A0A087WX48 190 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 TRAV26-2A0A0B4J265 109 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 TRBV6-5A0A0K0K1A5 114 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 A6NDN8 102 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 CBY3A6NI87 242 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 F5H697 171 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 GNRH2O43555 120 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 IGKV3-20P01619 116 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 HINT1P49773 126 aaPredicted RBP4.5□□□□□ -1.69
PTPN9-205ENST00000568108 FXYD7P58549 80 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 SEC11AP67812 179 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 ZNF415Q09FC8 603 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 SPINK13Q1W4C9 94 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 RASL10AQ92737 203 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 LINC00467Q9BRT7 94 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 DKK2Q9UBU2 259 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 CYSLTR1Q9Y271 337 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 FAT2Q9NYQ8 4349 aa4.5□□□□□ -1.69
PTPN9-205ENST00000568108 DNAH11Q96DT5 4516 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 TEX48A0A1B0GUV7 120 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 A8MTW9 85 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 A8MWV9 139 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 F8VRH5 84 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 RHODO00212 210 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 INSP01308 110 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 HTN3P15516 51 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
PTPN9-205ENST00000568108 ZNF25P17030 456 aaPredicted RBP4.49□□□□□ -1.69
PTPN9-205ENST00000568108 DEFB1P60022 68 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 HSD52Q0P140 79 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 RHOHQ15669 191 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 ZNF56Q15929 161 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 FAM222AQ5U5X8 452 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 ERASQ7Z444 233 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 BOD1L2Q8IYS8 172 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 ORAOV1Q8WV07 137 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 PTH2Q96A98 100 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
PTPN9-205ENST00000568108 TRAV12-2A0A075B6T6 113 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 C16orf90A8MZG2 172 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 NMUP48645 174 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 HERVK_113P61574 105 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 BVES-AS1Q5T3Y7 98 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 AMTNQ6UX39 209 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 Q6ZQT7 251 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 RPL39LQ96EH5 51 aaKnown RBP4.48□□□□□ -1.69
PTPN9-205ENST00000568108 SPXQ9BT56 116 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 HIGD1BQ9P298 99 aa4.48□□□□□ -1.69
PTPN9-205ENST00000568108 CHTOPQ9Y3Y2 248 aaKnown RBP4.48□□□□□ -1.69
PTPN9-205ENST00000568108 KIF25-AS1Q9Y6Z4 181 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms