RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
COMMD4-222ENST00000568034 COTL1Q14019 142 aa12.2□□□□□ -0.46
COMMD4-222ENST00000568034 NIT1Q86X76 327 aa12.2□□□□□ -0.46
COMMD4-222ENST00000568034 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
COMMD4-222ENST00000568034 FRAS1Q86XX4 4008 aa12.2□□□□□ -0.46
COMMD4-222ENST00000568034 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
COMMD4-222ENST00000568034 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
COMMD4-222ENST00000568034 APCSP02743 223 aa12.19□□□□□ -0.46
COMMD4-222ENST00000568034 KIAA1644Q3SXP7 199 aa12.19□□□□□ -0.46
COMMD4-222ENST00000568034 MT-ND6P03923 174 aa12.18□□□□□ -0.46
COMMD4-222ENST00000568034 PMCHP20382 165 aa12.18□□□□□ -0.46
COMMD4-222ENST00000568034 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
COMMD4-222ENST00000568034 VCYO14598 125 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 AMTP48728 403 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 TTC32Q5I0X7 151 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 CHCHD7Q9BUK0 85 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
COMMD4-222ENST00000568034 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
COMMD4-222ENST00000568034 PRSS47A8MTI9 375 aa12.16□□□□□ -0.46
COMMD4-222ENST00000568034 SCO1O75880 301 aa12.16□□□□□ -0.46
COMMD4-222ENST00000568034 CHCHD5Q9BSY4 110 aa12.16□□□□□ -0.46
COMMD4-222ENST00000568034 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
COMMD4-222ENST00000568034 ESDP10768 282 aa12.15□□□□□ -0.46
COMMD4-222ENST00000568034 GAGE6Q13070 117 aa12.15□□□□□ -0.46
COMMD4-222ENST00000568034 MPV17L2Q567V2 206 aa12.15□□□□□ -0.46
COMMD4-222ENST00000568034 K7EP13 123 aa12.14□□□□□ -0.47
COMMD4-222ENST00000568034 FABP9Q0Z7S8 132 aa12.14□□□□□ -0.47
COMMD4-222ENST00000568034 ALKBH7Q9BT30 221 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-222ENST00000568034 TRAPPC1Q9Y5R8 145 aa12.14□□□□□ -0.47
COMMD4-222ENST00000568034 MAP1LC3AQ9H492 121 aa12.13□□□□□ -0.47
COMMD4-222ENST00000568034 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-222ENST00000568034 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-222ENST00000568034 COLCA2A8K830 154 aa12.12□□□□□ -0.47
COMMD4-222ENST00000568034 IBA57-AS1B1ANH7 110 aa12.12□□□□□ -0.47
COMMD4-222ENST00000568034 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
COMMD4-222ENST00000568034 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
COMMD4-222ENST00000568034 Q8N976 141 aa12.12□□□□□ -0.47
COMMD4-222ENST00000568034 KIR2DL4Q99706 377 aa12.12□□□□□ -0.47
COMMD4-222ENST00000568034 EPPK1P58107 5090 aaKnown RBP12.11□□□□□ -0.47
COMMD4-222ENST00000568034 DNAH11Q96DT5 4516 aa12.11□□□□□ -0.47
COMMD4-222ENST00000568034 TRAV9-2A0A087WT02 112 aa12.11□□□□□ -0.47
COMMD4-222ENST00000568034 A0A087WX48 190 aa12.11□□□□□ -0.47
COMMD4-222ENST00000568034 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
COMMD4-222ENST00000568034 RTL8CO15255 209 aa12.11□□□□□ -0.47
COMMD4-222ENST00000568034 RBX1P62877 108 aa12.11□□□□□ -0.47
COMMD4-222ENST00000568034 TCAPO15273 167 aa12.1□□□□□ -0.47
COMMD4-222ENST00000568034 BTF3P20290 206 aaKnown RBP12.1□□□□□ -0.47
COMMD4-222ENST00000568034 FCER1GP30273 86 aa12.1□□□□□ -0.47
COMMD4-222ENST00000568034 PKIAP61925 76 aa12.1□□□□□ -0.47
COMMD4-222ENST00000568034 C6orf223Q8N319 242 aa12.1□□□□□ -0.47
COMMD4-222ENST00000568034 Q8N8P6 123 aa12.1□□□□□ -0.47
COMMD4-222ENST00000568034 IGLV4-60A0A075B6I1 120 aa12.09□□□□□ -0.47
COMMD4-222ENST00000568034 H7C423 109 aa12.09□□□□□ -0.47
COMMD4-222ENST00000568034 LAGE3Q14657 143 aa12.09□□□□□ -0.47
COMMD4-222ENST00000568034 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
COMMD4-222ENST00000568034 Q6ZRN7 208 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-222ENST00000568034 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
COMMD4-222ENST00000568034 KLK12Q9UKR0 248 aa12.09□□□□□ -0.47
COMMD4-222ENST00000568034 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
COMMD4-222ENST00000568034 UBE2L6O14933 153 aa12.08□□□□□ -0.48
COMMD4-222ENST00000568034 FGF6P10767 208 aa12.07□□□□□ -0.48
COMMD4-222ENST00000568034 IFI27P40305 119 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-222ENST00000568034 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
COMMD4-222ENST00000568034 ANGP03950 147 aaKnown RBP12.05□□□□□ -0.48
COMMD4-222ENST00000568034 RAB5AP20339 215 aa12.05□□□□□ -0.48
COMMD4-222ENST00000568034 ENHOQ6UWT2 76 aa12.05□□□□□ -0.48
COMMD4-222ENST00000568034 MRPL52Q86TS9 123 aaKnown RBP12.05□□□□□ -0.48
COMMD4-222ENST00000568034 PRR34Q9NV39 138 aa12.05□□□□□ -0.48
COMMD4-222ENST00000568034 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
COMMD4-222ENST00000568034 RPL39P62891 51 aaKnown RBP12.04□□□□□ -0.48
COMMD4-222ENST00000568034 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
COMMD4-222ENST00000568034 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
COMMD4-222ENST00000568034 Q9HAA7 133 aa12.04□□□□□ -0.48
COMMD4-222ENST00000568034 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
COMMD4-222ENST00000568034 TRGC2P03986 189 aa12.03□□□□□ -0.48
COMMD4-222ENST00000568034 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-222ENST00000568034 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
COMMD4-222ENST00000568034 LINC00269Q8N2A0 174 aa12.03□□□□□ -0.48
COMMD4-222ENST00000568034 URB1-AS1Q96HZ7 61 aa12.03□□□□□ -0.48
COMMD4-222ENST00000568034 K7EMI3 77 aa12.02□□□□□ -0.49
COMMD4-222ENST00000568034 RNASEKQ6P5S7 137 aaKnown RBP12.02□□□□□ -0.49
COMMD4-222ENST00000568034 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
COMMD4-222ENST00000568034 NFE4Q86UQ8 179 aa12.02□□□□□ -0.49
COMMD4-222ENST00000568034 PKD1P98161 4303 aa12.02□□□□□ -0.49
COMMD4-222ENST00000568034 TRAV8-3A0A0A6YYJ7 113 aa12.01□□□□□ -0.49
COMMD4-222ENST00000568034 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
COMMD4-222ENST00000568034 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
COMMD4-222ENST00000568034 TIMM21Q9BVV7 248 aa12.01□□□□□ -0.49
COMMD4-222ENST00000568034 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
COMMD4-222ENST00000568034 REG3AQ06141 175 aa12□□□□□ -0.49
COMMD4-222ENST00000568034 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
COMMD4-222ENST00000568034 OR5A1Q8NGJ0 315 aa12□□□□□ -0.49
COMMD4-222ENST00000568034 TMEM18Q96B42 140 aa12□□□□□ -0.49
COMMD4-222ENST00000568034 CDC42SE2Q9NRR3 84 aa12□□□□□ -0.49
COMMD4-222ENST00000568034 DYNC1H1Q14204 4646 aaKnown RBP11.99□□□□□ -0.49
COMMD4-222ENST00000568034 CRPP02741 224 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 323.9 ms