RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ODF1Q14990 250 aa10.46□□□□□ -0.73
COMMD4-221ENST00000567935 TIMM17AQ99595 171 aa10.46□□□□□ -0.73
COMMD4-221ENST00000567935 ZMAT4Q9H898 229 aa10.46□□□□□ -0.73
COMMD4-221ENST00000567935 NOP10Q9NPE3 64 aaKnown RBP10.46□□□□□ -0.73
COMMD4-221ENST00000567935 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
COMMD4-221ENST00000567935 Q6ZTI0 123 aa10.45□□□□□ -0.74
COMMD4-221ENST00000567935 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
COMMD4-221ENST00000567935 STAB2Q8WWQ8 2551 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 A0A087WX48 190 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 IGHV3-73A0A0B4J1V6 119 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 DPM2O94777 84 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 TSHBP01222 138 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 NPSP0C0P6 89 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
COMMD4-221ENST00000567935 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
COMMD4-221ENST00000567935 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
COMMD4-221ENST00000567935 PLNP26678 52 aa10.43□□□□□ -0.74
COMMD4-221ENST00000567935 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
COMMD4-221ENST00000567935 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
COMMD4-221ENST00000567935 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
COMMD4-221ENST00000567935 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 K7EQD1 137 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 IGKCP01834 107 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
COMMD4-221ENST00000567935 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 LINC00612Q8N6U2 182 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
COMMD4-221ENST00000567935 X6R8D5 127 aa10.42□□□□□ -0.74
COMMD4-221ENST00000567935 TRBV6-4A0A1B0GX49 114 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 LYRM9A8MSI8 78 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 A8MZ25 164 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 F8VRH5 84 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 MAJINQ3KP22 176 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 Q6ZSN1 163 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 ZNF479Q96JC4 524 aa10.41□□□□□ -0.74
COMMD4-221ENST00000567935 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 GAGE7O76087 117 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 P0DMU3 169 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 FAM231AP0DMU4 169 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 FAM231CP0DMU5 169 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 CRYBA4P53673 196 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 COTL1Q14019 142 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 DAZ4Q86SG3 579 aaKnown RBP10.4□□□□□ -0.74
COMMD4-221ENST00000567935 BAALCQ8WXS3 180 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 DAZ3Q9NR90 486 aaKnown RBP10.4□□□□□ -0.74
COMMD4-221ENST00000567935 DKK2Q9UBU2 259 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 PYGO1Q9Y3Y4 419 aa10.4□□□□□ -0.74
COMMD4-221ENST00000567935 IGHV4-30-4P0DP06 118 aa10.39□□□□□ -0.75
COMMD4-221ENST00000567935 MIFP14174 115 aa10.39□□□□□ -0.75
COMMD4-221ENST00000567935 LBHQ53QV2 105 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-221ENST00000567935 SLC25A34Q6PIV7 304 aa10.39□□□□□ -0.75
COMMD4-221ENST00000567935 C14orf144Q96I85 54 aa10.39□□□□□ -0.75
COMMD4-221ENST00000567935 CHTOPQ9Y3Y2 248 aaKnown RBP10.39□□□□□ -0.75
COMMD4-221ENST00000567935 FRAS1Q86XX4 4008 aa10.38□□□□□ -0.75
COMMD4-221ENST00000567935 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
COMMD4-221ENST00000567935 SMAGPQ0VAQ4 97 aa10.38□□□□□ -0.75
COMMD4-221ENST00000567935 PMVKQ15126 192 aa10.38□□□□□ -0.75
COMMD4-221ENST00000567935 SPANXA1Q9NS26 97 aa10.38□□□□□ -0.75
COMMD4-221ENST00000567935 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
COMMD4-221ENST00000567935 MRPS16Q9Y3D3 137 aaKnown RBP10.38□□□□□ -0.75
COMMD4-221ENST00000567935 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
COMMD4-221ENST00000567935 TRGV4A0A0C4DH28 118 aa10.37□□□□□ -0.75
COMMD4-221ENST00000567935 COX8AP10176 69 aa10.37□□□□□ -0.75
COMMD4-221ENST00000567935 SLC25A29Q8N8R3 303 aa10.37□□□□□ -0.75
COMMD4-221ENST00000567935 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
COMMD4-221ENST00000567935 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 DLEU1O43261 78 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 RPL39P62891 51 aaKnown RBP10.36□□□□□ -0.75
COMMD4-221ENST00000567935 DEFB135Q30KP9 77 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 RNF183Q96D59 192 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 HHLA3Q9XRX5 114 aa10.36□□□□□ -0.75
COMMD4-221ENST00000567935 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
COMMD4-221ENST00000567935 M0R143 59 aa10.35□□□□□ -0.75
COMMD4-221ENST00000567935 UBE2D3P61077 147 aa10.35□□□□□ -0.75
COMMD4-221ENST00000567935 UBE2D2P62837 147 aa10.35□□□□□ -0.75
COMMD4-221ENST00000567935 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
COMMD4-221ENST00000567935 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
COMMD4-221ENST00000567935 EMP1P54849 157 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 FHL2Q14192 279 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 ZC2HC1BQ5TFG8 222 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
COMMD4-221ENST00000567935 STPG4Q8N801 248 aa10.33□□□□□ -0.76
COMMD4-221ENST00000567935 VCX2Q9H322 139 aa10.33□□□□□ -0.76
COMMD4-221ENST00000567935 ALMS1Q8TCU4 4167 aa10.33□□□□□ -0.76
COMMD4-221ENST00000567935 IGLV4-3A0A075B6K6 122 aa10.32□□□□□ -0.76
COMMD4-221ENST00000567935 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
COMMD4-221ENST00000567935 SIVA1O15304 175 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms