RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
CLN6-207ENST00000566347 COTL1Q14019 142 aa13.06□□□□□ -0.32
CLN6-207ENST00000566347 AKAP14Q86UN6 197 aa13.06□□□□□ -0.32
CLN6-207ENST00000566347 TMEM250H0YL14 139 aa13.05□□□□□ -0.32
CLN6-207ENST00000566347 AMTP48728 403 aa13.05□□□□□ -0.32
CLN6-207ENST00000566347 C9orf163Q8N9P6 203 aa13.05□□□□□ -0.32
CLN6-207ENST00000566347 IGLV4-60A0A075B6I1 120 aa13.04□□□□□ -0.32
CLN6-207ENST00000566347 IGLV10-54A0A075B6I4 117 aa13.04□□□□□ -0.32
CLN6-207ENST00000566347 SMIM15Q7Z3B0 74 aa13.04□□□□□ -0.32
CLN6-207ENST00000566347 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
CLN6-207ENST00000566347 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
CLN6-207ENST00000566347 ALKAL2Q6UX46 152 aa13.02□□□□□ -0.33
CLN6-207ENST00000566347 GTSF1Q8WW33 167 aa13.02□□□□□ -0.33
CLN6-207ENST00000566347 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
CLN6-207ENST00000566347 GATCO43716 136 aaKnown RBP13.01□□□□□ -0.33
CLN6-207ENST00000566347 KRTAP10-4P60372 401 aaPredicted RBP13.01□□□□□ -0.33
CLN6-207ENST00000566347 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
CLN6-207ENST00000566347 FAM231DQ6ZW35 169 aa13.01□□□□□ -0.33
CLN6-207ENST00000566347 GFRA4Q9GZZ7 299 aa13.01□□□□□ -0.33
CLN6-207ENST00000566347 hDV102S1A0JD36 115 aa13□□□□□ -0.33
CLN6-207ENST00000566347 A8MWL6 223 aa13□□□□□ -0.33
CLN6-207ENST00000566347 CNBPP62633 177 aaKnown RBP13□□□□□ -0.33
CLN6-207ENST00000566347 LYPD6BQ8NI32 183 aa13□□□□□ -0.33
CLN6-207ENST00000566347 NCR2O95944 276 aa12.99□□□□□ -0.33
CLN6-207ENST00000566347 CT83Q5H943 113 aa12.98□□□□□ -0.33
CLN6-207ENST00000566347 AP5S1Q9NUS5 200 aa12.98□□□□□ -0.33
CLN6-207ENST00000566347 CEBPGP53567 150 aa12.97□□□□□ -0.33
CLN6-207ENST00000566347 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
CLN6-207ENST00000566347 RPL39LQ96EH5 51 aaKnown RBP12.97□□□□□ -0.33
CLN6-207ENST00000566347 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
CLN6-207ENST00000566347 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.96□□□□□ -0.33
CLN6-207ENST00000566347 H7C423 109 aa12.96□□□□□ -0.33
CLN6-207ENST00000566347 NDUFS6O75380 124 aaKnown RBP12.96□□□□□ -0.33
CLN6-207ENST00000566347 FOXA3P55318 350 aaPredicted RBP12.96□□□□□ -0.33
CLN6-207ENST00000566347 RPL37AP61513 92 aaKnown RBP12.96□□□□□ -0.33
CLN6-207ENST00000566347 AMMECR1LQ6DCA0 310 aa12.96□□□□□ -0.33
CLN6-207ENST00000566347 BORCS7Q96B45 105 aa12.96□□□□□ -0.33
CLN6-207ENST00000566347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.96□□□□□ -0.33
CLN6-207ENST00000566347 APCSP02743 223 aa12.95□□□□□ -0.34
CLN6-207ENST00000566347 IGHV3-64A0A075B6Q5 118 aa12.94□□□□□ -0.34
CLN6-207ENST00000566347 SDHAF1A6NFY7 115 aa12.94□□□□□ -0.34
CLN6-207ENST00000566347 CFAP161Q6P656 301 aa12.94□□□□□ -0.34
CLN6-207ENST00000566347 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
CLN6-207ENST00000566347 EIF5A2Q9GZV4 153 aaKnown RBP12.94□□□□□ -0.34
CLN6-207ENST00000566347 OXTP01178 125 aa12.93□□□□□ -0.34
CLN6-207ENST00000566347 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.92□□□□□ -0.34
CLN6-207ENST00000566347 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
CLN6-207ENST00000566347 TRBV6-5A0A0K0K1A5 114 aa12.92□□□□□ -0.34
CLN6-207ENST00000566347 IGKV2-29A2NJV5 120 aaPredicted RBP12.92□□□□□ -0.34
CLN6-207ENST00000566347 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
CLN6-207ENST00000566347 I3L3M4 83 aa12.92□□□□□ -0.34
CLN6-207ENST00000566347 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
CLN6-207ENST00000566347 RNASEKQ6P5S7 137 aaKnown RBP12.92□□□□□ -0.34
CLN6-207ENST00000566347 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
CLN6-207ENST00000566347 PANO1I0J062 215 aa12.91□□□□□ -0.34
CLN6-207ENST00000566347 FGF6P10767 208 aa12.91□□□□□ -0.34
CLN6-207ENST00000566347 ZNF25P17030 456 aaPredicted RBP12.91□□□□□ -0.34
CLN6-207ENST00000566347 PMCHP20382 165 aa12.91□□□□□ -0.34
CLN6-207ENST00000566347 TSKUQ8WUA8 353 aa12.91□□□□□ -0.34
CLN6-207ENST00000566347 FAM210AQ96ND0 272 aa12.91□□□□□ -0.34
CLN6-207ENST00000566347 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
CLN6-207ENST00000566347 FAM231BA6NCW3 169 aa12.9□□□□□ -0.34
CLN6-207ENST00000566347 HIGD1CA8MV81 97 aa12.9□□□□□ -0.34
CLN6-207ENST00000566347 SLPIP03973 132 aa12.9□□□□□ -0.34
CLN6-207ENST00000566347 LRP1Q07954 4544 aaKnown RBP12.9□□□□□ -0.34
CLN6-207ENST00000566347 ZNF727A8MUV8 499 aa12.89□□□□□ -0.35
CLN6-207ENST00000566347 C15orf56Q8N910 161 aa12.89□□□□□ -0.35
CLN6-207ENST00000566347 CHCHD10Q8WYQ3 142 aaPredicted RBP12.89□□□□□ -0.35
CLN6-207ENST00000566347 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
CLN6-207ENST00000566347 TMEM191AQ9H0A3 160 aa12.89□□□□□ -0.35
CLN6-207ENST00000566347 ST20Q9HBF5 79 aa12.89□□□□□ -0.35
CLN6-207ENST00000566347 OSTCQ9NRP0 149 aa12.89□□□□□ -0.35
CLN6-207ENST00000566347 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
CLN6-207ENST00000566347 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
CLN6-207ENST00000566347 DPH3Q96FX2 82 aa12.87□□□□□ -0.35
CLN6-207ENST00000566347 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
CLN6-207ENST00000566347 SRP19P09132 144 aaKnown RBP12.86□□□□□ -0.35
CLN6-207ENST00000566347 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
CLN6-207ENST00000566347 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
CLN6-207ENST00000566347 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
CLN6-207ENST00000566347 PKHD1L1Q86WI1 4243 aa12.86□□□□□ -0.35
CLN6-207ENST00000566347 TSHBP01222 138 aa12.85□□□□□ -0.35
CLN6-207ENST00000566347 ESDP10768 282 aa12.85□□□□□ -0.35
CLN6-207ENST00000566347 RPS10P46783 165 aaKnown RBP12.85□□□□□ -0.35
CLN6-207ENST00000566347 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
CLN6-207ENST00000566347 TMEM242Q9NWH2 141 aa12.85□□□□□ -0.35
CLN6-207ENST00000566347 GVQW2A0A096LPI5 108 aaPredicted RBP12.84□□□□□ -0.35
CLN6-207ENST00000566347 GAS8-AS1O95177 125 aa12.84□□□□□ -0.35
CLN6-207ENST00000566347 RAB4AP20338 218 aa12.84□□□□□ -0.35
CLN6-207ENST00000566347 HIGD2BQ4VC39 106 aa12.84□□□□□ -0.35
CLN6-207ENST00000566347 A0A087WYN8 130 aa12.83□□□□□ -0.36
CLN6-207ENST00000566347 TRBV27A0A0K0K1C4 114 aa12.83□□□□□ -0.36
CLN6-207ENST00000566347 CHTF8P0CG12 524 aa12.83□□□□□ -0.36
CLN6-207ENST00000566347 POLR2KP53803 58 aaKnown RBP12.83□□□□□ -0.36
CLN6-207ENST00000566347 FOXI1Q12951 378 aa12.83□□□□□ -0.36
CLN6-207ENST00000566347 RIGQ13278 110 aa12.83□□□□□ -0.36
CLN6-207ENST00000566347 SERTAD4-AS1Q5TG53 156 aa12.83□□□□□ -0.36
CLN6-207ENST00000566347 PPP1R17O96001 155 aa12.82□□□□□ -0.36
CLN6-207ENST00000566347 HNRNPA3P51991 378 aaKnown RBP12.82□□□□□ -0.36
CLN6-207ENST00000566347 FAM74A3Q4VXF1 159 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms