RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 GNB1LQ9BYB4 327 aa5.54□□□□□ -1.52
CDH13-208ENST00000566333 Q9H8V8 135 aa5.54□□□□□ -1.52
CDH13-208ENST00000566333 ST20Q9HBF5 79 aa5.54□□□□□ -1.52
CDH13-208ENST00000566333 TRAV8-6A0A0B4J262 113 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 LCE2BO14633 110 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 PHOX2AO14813 284 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 SCO1O75880 301 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 MT-ND6P03923 174 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 RPL32P62910 135 aaKnown RBP5.53□□□□□ -1.52
CDH13-208ENST00000566333 NIT1Q86X76 327 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 PRELID3AQ96N28 172 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 CHCHD7Q9BUK0 85 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 SMIM2Q9BVW6 85 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 SMCO4Q9NRQ5 59 aa5.53□□□□□ -1.52
CDH13-208ENST00000566333 TRBV25-1A0A075B6N4 114 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 IGHV1-24A0A0C4DH33 117 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 I3L3M4 83 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 M0R2N4 97 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 PPP1R17O96001 155 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 APCSP02743 223 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 COTL1Q14019 142 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 KIAA1644Q3SXP7 199 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 COX19Q49B96 90 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 MPV17L2Q567V2 206 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 TMEM97Q5BJF2 176 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 C20orf78Q9BR46 151 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 MRPL18Q9H0U6 180 aaKnown RBP5.52□□□□□ -1.53
CDH13-208ENST00000566333 LAMTOR2Q9Y2Q5 125 aa5.52□□□□□ -1.53
CDH13-208ENST00000566333 PRSS47A8MTI9 375 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 IGHV3-30P01768 117 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 IGHV3-33P01772 117 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 IGHV3-30-3P0DP02 117 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 IGHV3-30-5P0DP03 117 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 ESDP10768 282 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 AMTP48728 403 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 TTC32Q5I0X7 151 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.51□□□□□ -1.53
CDH13-208ENST00000566333 ALKBH7Q9BT30 221 aaPredicted RBP5.51□□□□□ -1.53
CDH13-208ENST00000566333 TMEM243Q9BU79 118 aa5.51□□□□□ -1.53
CDH13-208ENST00000566333 EPPK1P58107 5090 aaKnown RBP5.5□□□□□ -1.53
CDH13-208ENST00000566333 COLCA2A8K830 154 aa5.5□□□□□ -1.53
CDH13-208ENST00000566333 VCYO14598 125 aa5.5□□□□□ -1.53
CDH13-208ENST00000566333 PMCHP20382 165 aa5.5□□□□□ -1.53
CDH13-208ENST00000566333 GAGE6Q13070 117 aa5.5□□□□□ -1.53
CDH13-208ENST00000566333 Q6ZRN7 208 aaPredicted RBP5.5□□□□□ -1.53
CDH13-208ENST00000566333 CHCHD5Q9BSY4 110 aa5.5□□□□□ -1.53
CDH13-208ENST00000566333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
CDH13-208ENST00000566333 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
CDH13-208ENST00000566333 IBA57-AS1B1ANH7 110 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 K7EP13 123 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 RTL8CO15255 209 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 RBX1P62877 108 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 FABP9Q0Z7S8 132 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 LAGE3Q14657 143 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 Q8N976 141 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 C20orf203Q8NBC4 194 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 KIR2DL4Q99706 377 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 MAP1LC3AQ9H492 121 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 TRAPPC1Q9Y5R8 145 aa5.49□□□□□ -1.53
CDH13-208ENST00000566333 IGLV4-60A0A075B6I1 120 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 A0A087WX48 190 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 LOC389332A0A1B0GUA5 103 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 TCAPO15273 167 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
CDH13-208ENST00000566333 C6orf223Q8N319 242 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 C10orf126Q8N4M7 172 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 Q8N8P6 123 aa5.48□□□□□ -1.53
CDH13-208ENST00000566333 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
CDH13-208ENST00000566333 DNAH5Q8TE73 4624 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 A0A1B0GUV1 79 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 LINC01546A6NGU7 62 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 H7C423 109 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 FGF6P10767 208 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 BTF3P20290 206 aaKnown RBP5.47□□□□□ -1.53
CDH13-208ENST00000566333 RAB5AP20339 215 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 S100A1P23297 94 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 FCER1GP30273 86 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 IFI27P40305 119 aaPredicted RBP5.47□□□□□ -1.53
CDH13-208ENST00000566333 PKIAP61925 76 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 RPL39P62891 51 aaKnown RBP5.47□□□□□ -1.53
CDH13-208ENST00000566333 C1orf134Q5TEV5 83 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 C18orf32Q8TCD1 76 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 FAM104AQ969W3 186 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 URB1-AS1Q96HZ7 61 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 PRR34Q9NV39 138 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 KLK12Q9UKR0 248 aa5.47□□□□□ -1.53
CDH13-208ENST00000566333 TRAV9-2A0A087WT02 112 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 TMEM262E9PQX1 116 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 UBE2L6O14933 153 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 ANGP03950 147 aaKnown RBP5.46□□□□□ -1.54
CDH13-208ENST00000566333 CLPSL2Q6UWE3 100 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 ENHOQ6UWT2 76 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 Q9HAA7 133 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
CDH13-208ENST00000566333 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
CDH13-208ENST00000566333 K7EMI3 77 aa5.45□□□□□ -1.54
CDH13-208ENST00000566333 TRGC2P03986 189 aa5.45□□□□□ -1.54
CDH13-208ENST00000566333 ZNF25P17030 456 aaPredicted RBP5.45□□□□□ -1.54
CDH13-208ENST00000566333 Q6ZUT4 128 aa5.45□□□□□ -1.54
CDH13-208ENST00000566333 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms