RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 IGHV3-73A0A0B4J1V6 119 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 TEX48A0A1B0GUV7 120 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 LINC00587B1AMM8 73 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 F8VRH5 84 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 P0DMU3 169 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 FAM231AP0DMU4 169 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 FAM231CP0DMU5 169 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 PLNP26678 52 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 PAPPA-AS1Q5QFB9 102 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 NEGR1Q7Z3B1 354 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 TIMM21Q9BVV7 248 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 TENM1Q9UKZ4 2725 aa6.3□□□□□ -1.4
LSM3P5-201ENST00000566307 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 GAGE7O76087 117 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 DPM2O94777 84 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 IGKCP01834 107 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 GAGE12FP0CL80 117 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 GAGE12GP0CL81 117 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 GAGE12IP0CL82 117 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 KRTAP10-11P60412 298 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 UBE2D3P61077 147 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 UBE2D2P62837 147 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 COTL1Q14019 142 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 FHL2Q14192 279 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 Q8NAQ8 132 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 PMCHL2Q9BQD1 86 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 GTSF1LQ9H1H1 148 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 SPANXA1Q9NS26 97 aa6.29□□□□□ -1.4
LSM3P5-201ENST00000566307 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 DLEU1O43261 78 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 SMAGPQ0VAQ4 97 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 PMVKQ15126 192 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 DEFB135Q30KP9 77 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 TMEM97Q5BJF2 176 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 OR11H2Q8NH07 326 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 DKK2Q9UBU2 259 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
LSM3P5-201ENST00000566307 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 H0Y8G0 127 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 H7C423 109 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 DEFA6Q01524 100 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 MAJINQ3KP22 176 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 ZNRF2Q8NHG8 242 aa6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 MRPL35Q9NZE8 188 aaKnown RBP6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 CSDC2Q9Y534 153 aaKnown RBP6.27□□□□□ -1.41
LSM3P5-201ENST00000566307 IGHV4-28A0A0C4DH34 117 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 COX8AP10176 69 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 RPL39P62891 51 aaKnown RBP6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 LBHQ53QV2 105 aaPredicted RBP6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 FAM222AQ5U5X8 452 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 SLC25A34Q6PIV7 304 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 NFE4Q86UQ8 179 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 SBSPONQ8IVN8 264 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 AMELXQ99217 191 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 Q9UF83 564 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 PRO0255Q9UI72 69 aa6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 NIPBLQ6KC79 2804 aaeCLIP6.26□□□□□ -1.41
LSM3P5-201ENST00000566307 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
LSM3P5-201ENST00000566307 SIVA1O15304 175 aa6.25□□□□□ -1.41
LSM3P5-201ENST00000566307 SPART-AS1P0CW21 52 aa6.25□□□□□ -1.41
LSM3P5-201ENST00000566307 C14orf144Q96I85 54 aa6.25□□□□□ -1.41
LSM3P5-201ENST00000566307 UBE2D4Q9Y2X8 147 aa6.25□□□□□ -1.41
LSM3P5-201ENST00000566307 MAST4O15021 2626 aa6.25□□□□□ -1.41
LSM3P5-201ENST00000566307 VWFP04275 2813 aa6.24□□□□□ -1.41
LSM3P5-201ENST00000566307 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
LSM3P5-201ENST00000566307 FGF6P10767 208 aa6.24□□□□□ -1.41
LSM3P5-201ENST00000566307 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
LSM3P5-201ENST00000566307 BOD1L2Q8IYS8 172 aa6.24□□□□□ -1.41
LSM3P5-201ENST00000566307 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
LSM3P5-201ENST00000566307 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 C11orf86A6NJI1 115 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 G3V4G9 280 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 ATP5G1P05496 136 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 DEFB130BP0DP73 79 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 DEFB130AP0DP74 79 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 ZNF25P17030 456 aaPredicted RBP6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 HNRNPA3P51991 378 aaKnown RBP6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 EMP1P54849 157 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 DAD1P61803 113 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 GAGE1Q13065 139 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 GAGE4Q13068 117 aa6.23□□□□□ -1.41
LSM3P5-201ENST00000566307 GAGE5Q13069 117 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms