RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 BORCS8Q96FH0 119 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 BTF3L4Q96K17 158 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 ZNF714Q96N38 554 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 PHB2Q99623 299 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 SIGMAR1Q99720 223 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 RNASE7Q9H1E1 156 aaKnown RBP0.96□□□□□ -2.26
PALB2-203ENST00000565038 ENY2Q9NPA8 101 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 UQCC1Q9NVA1 299 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 CKLFQ9UBR5 152 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 NUBP2Q9Y5Y2 271 aa0.96□□□□□ -2.26
PALB2-203ENST00000565038 FAT4Q6V0I7 4981 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TRGV10A0A0A0MS01 117 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TRAV3A0A0B4J244 114 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 A0A1B0GW64 132 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 IBA57-AS1B1ANH7 110 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 SULT1C4O75897 302 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 OR7C1O76099 320 aaPredicted RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 FAM107AO95990 144 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 APOC1P02654 83 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 ZNF705BP0CI00 300 aaPredicted RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 PRB4P10163 310 aaPredicted RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 ERP29P30040 261 aaKnown RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 DYNLT3P51808 116 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 SNRPGP62308 76 aaKnown RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 RHOBP62745 196 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 QRFPP83859 136 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 ZNF345Q14585 488 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 MORN2Q502X0 79 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TMEM97Q5BJF2 176 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 MINOS1Q5TGZ0 78 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 RPL13AP3Q6NVV1 102 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 LCN15Q6UWW0 184 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 LINC00322Q6ZN03 302 aaPredicted RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 TMEM91Q6ZNR0 172 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 C6orf201Q7Z4U5 140 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TRAPPC6BQ86SZ2 158 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 HIST3H2BBQ8N257 126 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TEX29Q8N6K0 151 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 ACBD7Q8N6N7 88 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 OR5A1Q8NGJ0 315 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 OR2T10Q8NGZ9 312 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 OR5AK2Q8NH90 309 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TMEM203Q969S6 136 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 GPER1Q99527 375 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 WFDC10AQ9H1F0 79 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 TAF9BQ9HBM6 251 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 CYSLTR1Q9Y271 337 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 LINC00312Q9Y6C7 94 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 LRP2P98164 4655 aa0.95□□□□□ -2.26
PALB2-203ENST00000565038 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
PALB2-203ENST00000565038 TNXBP22105 4242 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 TRAV14DV4A0A0A6YYC5 116 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 TMEM30CPA0ZSE6 113 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 TMEM14DPA8MWL7 114 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 MCRIP1C9JLW8 97 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 PPP5D1E7EU14 171 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 DEFB4AO15263 64 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 SULT1B1O43704 296 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 YPEL1O60688 119 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 CYB5AP00167 134 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 CTXN2P0C2S0 81 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 BRS3P32247 399 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 ZNF93P35789 620 aaPredicted RBP0.94□□□□□ -2.26
PALB2-203ENST00000565038 ZNF80P51504 273 aaPredicted RBP0.94□□□□□ -2.26
PALB2-203ENST00000565038 DEFB1P60022 68 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 CDC42P60953 191 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 RPS25P62851 125 aaKnown RBP0.94□□□□□ -2.26
PALB2-203ENST00000565038 SURF2Q15527 256 aaPredicted RBP0.94□□□□□ -2.26
PALB2-203ENST00000565038 DEFB114Q30KQ6 69 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 C12orf74Q32Q52 190 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 SMIM21Q3B7S5 101 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 C10orf55Q5SWW7 151 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 UNQ5815/PRO19632Q6UWF5 114 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 IDO2Q6ZQW0 420 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 LINC00311Q8N616 119 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 PXT1Q8NFP0 134 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 OR5D14Q8NGL3 314 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 OR5H6Q8NGV6 325 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 OR10X1Q8NGY0 326 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 TERB2Q8NHR7 220 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 MYOZ3Q8TDC0 251 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 PP6455Q8WZ26 134 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 ARHGAP5-AS1Q96IT6 56 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 YPEL2Q96QA6 119 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 RETNLBQ9BQ08 111 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 SLC50A1Q9BRV3 221 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 LPAR5Q9H1C0 372 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 OSTCQ9NRP0 149 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 TRAPPC2LQ9UL33 140 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 NOP16Q9Y3C1 178 aaKnown RBP0.94□□□□□ -2.26
PALB2-203ENST00000565038 TNCP24821 2201 aa0.94□□□□□ -2.26
PALB2-203ENST00000565038 LPAP08519 4548 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 IGKV3-7A0A075B6H7 116 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 TRAV1-1A0A0B4J248 108 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 LCE6AA0A183 80 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 EFCAB10A6NFE3 127 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 OOSP1A8MZH6 123 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 M0R2N4 97 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 AIPO00170 330 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 NDUFA3O95167 84 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms