RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MT-ND4LP03901 98 aa9.05□□□□□ -0.96
VPS9D1-204ENST00000565023 ANAPC16Q96DE5 110 aa9.05□□□□□ -0.96
VPS9D1-204ENST00000565023 SEC11CQ9BY50 192 aa9.05□□□□□ -0.96
VPS9D1-204ENST00000565023 A0A1B0GW15 77 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 RAB4AP20338 218 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 XGP55808 180 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 NTM-AS1Q6ZSK4 140 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 RMI2Q96E14 147 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
VPS9D1-204ENST00000565023 A0A1B0GXF2 115 aa9.03□□□□□ -0.96
VPS9D1-204ENST00000565023 GAGE6Q13070 117 aa9.03□□□□□ -0.96
VPS9D1-204ENST00000565023 ELOBQ15370 118 aa9.03□□□□□ -0.96
VPS9D1-204ENST00000565023 MPV17L2Q567V2 206 aa9.03□□□□□ -0.96
VPS9D1-204ENST00000565023 AMN1Q8IY45 258 aa9.03□□□□□ -0.96
VPS9D1-204ENST00000565023 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
VPS9D1-204ENST00000565023 CRPP02741 224 aa9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 CAMPP49913 170 aa9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 Q8N976 141 aa9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 MRAP2Q96G30 205 aa9.02□□□□□ -0.97
VPS9D1-204ENST00000565023 TRBV6-5A0A0K0K1A5 114 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 EPM2AB3EWF7 344 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 GAS8-AS1O95177 125 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 S100A8P05109 93 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 HBBP68871 147 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 IQCJQ1A5X6 159 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 MRPL54Q6P161 138 aaKnown RBP9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 ATP5L2Q7Z4Y8 100 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 CHCHD7Q9BUK0 85 aa9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
VPS9D1-204ENST00000565023 ATRAIDQ6UW56 229 aa9□□□□□ -0.97
VPS9D1-204ENST00000565023 C1orf43Q9BWL3 253 aa9□□□□□ -0.97
VPS9D1-204ENST00000565023 CTDSP1Q9GZU7 261 aa9□□□□□ -0.97
VPS9D1-204ENST00000565023 COX11Q9Y6N1 276 aa9□□□□□ -0.97
VPS9D1-204ENST00000565023 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 PKIAP61925 76 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 LINC01620Q4KN68 170 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 MRPL51Q4U2R6 128 aaKnown RBP8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
VPS9D1-204ENST00000565023 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
VPS9D1-204ENST00000565023 Q0VG73 95 aa8.98□□□□□ -0.97
VPS9D1-204ENST00000565023 COTL1Q14019 142 aa8.98□□□□□ -0.97
VPS9D1-204ENST00000565023 NRACQ8N912 160 aa8.98□□□□□ -0.97
VPS9D1-204ENST00000565023 FAM30AQ9NZY2 134 aa8.98□□□□□ -0.97
VPS9D1-204ENST00000565023 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 NCR2O95944 276 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 PPP1R17O96001 155 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 POLR2KP53803 58 aaKnown RBP8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 RBX1P62877 108 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 Q5VSD8 79 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 BTF3L4Q96K17 158 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 TMEM70Q9BUB7 260 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
VPS9D1-204ENST00000565023 I3L3M4 83 aa8.96□□□□□ -0.98
VPS9D1-204ENST00000565023 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.98
VPS9D1-204ENST00000565023 TMEM242Q9NWH2 141 aa8.96□□□□□ -0.98
VPS9D1-204ENST00000565023 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
VPS9D1-204ENST00000565023 TRBV27A0A0K0K1C4 114 aa8.95□□□□□ -0.98
VPS9D1-204ENST00000565023 C7orf77A4D0Y5 90 aa8.95□□□□□ -0.98
VPS9D1-204ENST00000565023 AMTP48728 403 aa8.95□□□□□ -0.98
VPS9D1-204ENST00000565023 CLRN3Q8NCR9 226 aa8.95□□□□□ -0.98
VPS9D1-204ENST00000565023 IGLV10-54A0A075B6I4 117 aa8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 PPBPP02775 128 aa8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 PMCHP20382 165 aa8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 CKS2P33552 79 aa8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 SUMO2P61956 95 aaKnown RBP8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 RHEBQ15382 184 aa8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 MYCBP2O75592 4640 aa8.94□□□□□ -0.98
VPS9D1-204ENST00000565023 TRAV9-1A0A075B6T8 112 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 A0A1B0GUV1 79 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 D6R8Y8 96 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 VCYO14598 125 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 UBE2L6O14933 153 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 TSHBP01222 138 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 APCSP02743 223 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 MIAQ16674 131 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 C20orf78Q9BR46 151 aa8.93□□□□□ -0.98
VPS9D1-204ENST00000565023 DNAH8Q96JB1 4490 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 IGLV4-60A0A075B6I1 120 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 USP17L23D6RBM5 183 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 ESDP10768 282 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 RPL32P62910 135 aaKnown RBP8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 REG3AQ06141 175 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 C20orf203Q8NBC4 194 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 RPS10P5Q9NQ39 176 aa8.92□□□□□ -0.98
VPS9D1-204ENST00000565023 IGKV3OR2-268A0A0C4DH90 116 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms