RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 SCXQ7RTU7 201 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 LINC01551Q86U37 167 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 FAM210AQ96ND0 272 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 SMIM7Q9BQ49 75 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 TMEM243Q9BU79 118 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 EIF5A2Q9GZV4 153 aaKnown RBP6.01□□□□□ -1.45
PTPN9-203ENST00000563835 NIT2Q9NQR4 276 aa6.01□□□□□ -1.45
PTPN9-203ENST00000563835 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
PTPN9-203ENST00000563835 SRP19P09132 144 aaKnown RBP6□□□□□ -1.45
PTPN9-203ENST00000563835 REG3AQ06141 175 aa6□□□□□ -1.45
PTPN9-203ENST00000563835 ZNF727A8MUV8 499 aa5.99□□□□□ -1.45
PTPN9-203ENST00000563835 C9JQL5 133 aa5.99□□□□□ -1.45
PTPN9-203ENST00000563835 PRSS1P07477 247 aa5.99□□□□□ -1.45
PTPN9-203ENST00000563835 AMTP48728 403 aa5.99□□□□□ -1.45
PTPN9-203ENST00000563835 COTL1Q14019 142 aa5.99□□□□□ -1.45
PTPN9-203ENST00000563835 LINC00528Q8N1L1 170 aa5.99□□□□□ -1.45
PTPN9-203ENST00000563835 HIGD1CA8MV81 97 aa5.98□□□□□ -1.45
PTPN9-203ENST00000563835 A8MWL6 223 aa5.98□□□□□ -1.45
PTPN9-203ENST00000563835 FAM229AH3BQW9 127 aa5.98□□□□□ -1.45
PTPN9-203ENST00000563835 UBE2L6O14933 153 aa5.98□□□□□ -1.45
PTPN9-203ENST00000563835 SRSF3P84103 164 aaKnown RBP5.98□□□□□ -1.45
PTPN9-203ENST00000563835 CT83Q5H943 113 aa5.98□□□□□ -1.45
PTPN9-203ENST00000563835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.97□□□□□ -1.45
PTPN9-203ENST00000563835 IGKV3OR2-268A0A0C4DH90 116 aa5.97□□□□□ -1.45
PTPN9-203ENST00000563835 IGKV2-29A2NJV5 120 aaPredicted RBP5.97□□□□□ -1.45
PTPN9-203ENST00000563835 RPS10P46783 165 aaKnown RBP5.97□□□□□ -1.45
PTPN9-203ENST00000563835 C14orf177Q52M58 125 aa5.97□□□□□ -1.45
PTPN9-203ENST00000563835 TSKUQ8WUA8 353 aa5.97□□□□□ -1.45
PTPN9-203ENST00000563835 V9GYV3 84 aa5.97□□□□□ -1.45
PTPN9-203ENST00000563835 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.45
PTPN9-203ENST00000563835 A0A1B0GUV1 79 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 SDHAF1A6NFY7 115 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 NCR2O95944 276 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 APCSP02743 223 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
PTPN9-203ENST00000563835 IFITM2Q01629 132 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 SMIM15Q7Z3B0 74 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 CIRBP-AS1Q8TBR5 109 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 ISOC2Q96AB3 205 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 RNF185Q96GF1 192 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 CHAC1Q9BUX1 264 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 OSTCQ9NRP0 149 aa5.96□□□□□ -1.46
PTPN9-203ENST00000563835 A0A1B0GUT8 65 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 SMKR1H3BMG3 65 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 PANO1I0J062 215 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 NDUFS6O75380 124 aaKnown RBP5.95□□□□□ -1.46
PTPN9-203ENST00000563835 TSHBP01222 138 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
PTPN9-203ENST00000563835 ADIRFQ15847 76 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 TEX261Q6UWH6 196 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 AMN1Q8IY45 258 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 NUP35Q8NFH5 326 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 BORCS7Q96B45 105 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 TMEM242Q9NWH2 141 aa5.95□□□□□ -1.46
PTPN9-203ENST00000563835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
PTPN9-203ENST00000563835 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 TRAV8-4A0A0B4J246 113 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 hDV102S1A0JD36 115 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 FAM231BA6NCW3 169 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 GAGE12HA6NDE8 117 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 FGF6P10767 208 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 RAB4AP20338 218 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 RNASEKQ6P5S7 137 aaKnown RBP5.94□□□□□ -1.46
PTPN9-203ENST00000563835 C15orf56Q8N910 161 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 TMEM191AQ9H0A3 160 aa5.94□□□□□ -1.46
PTPN9-203ENST00000563835 TRBV6-5A0A0K0K1A5 114 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 I3L3M4 83 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 SLPIP03973 132 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 PLA2G1BP04054 148 aaKnown RBP5.93□□□□□ -1.46
PTPN9-203ENST00000563835 TMEM241Q24JQ0 296 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 C9orf163Q8N9P6 203 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 ST20Q9HBF5 79 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 NAT8Q9UHE5 227 aa5.93□□□□□ -1.46
PTPN9-203ENST00000563835 ESDP10768 282 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 PMCHP20382 165 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
PTPN9-203ENST00000563835 HIGD2BQ4VC39 106 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 FAM74A3Q4VXF1 159 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 DGAT2L7PQ6IED9 249 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 NRACQ8N912 160 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
PTPN9-203ENST00000563835 MRAP2Q96G30 205 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 NAT8BQ9UHF3 227 aa5.92□□□□□ -1.46
PTPN9-203ENST00000563835 TRBV27A0A0K0K1C4 114 aa5.91□□□□□ -1.46
PTPN9-203ENST00000563835 SMIM27A0A1W2PRY6 76 aa5.91□□□□□ -1.46
PTPN9-203ENST00000563835 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
PTPN9-203ENST00000563835 POLR2KP53803 58 aaKnown RBP5.91□□□□□ -1.46
PTPN9-203ENST00000563835 RIGQ13278 110 aa5.91□□□□□ -1.46
PTPN9-203ENST00000563835 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
PTPN9-203ENST00000563835 DMBT1Q9UGM3 2413 aaPredicted RBP5.91□□□□□ -1.46
PTPN9-203ENST00000563835 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
PTPN9-203ENST00000563835 H7C423 109 aa5.9□□□□□ -1.46
PTPN9-203ENST00000563835 CAMPP49913 170 aa5.9□□□□□ -1.46
PTPN9-203ENST00000563835 FOXI1Q12951 378 aa5.9□□□□□ -1.46
PTPN9-203ENST00000563835 PEA15Q15121 130 aa5.9□□□□□ -1.46
PTPN9-203ENST00000563835 MRPL51Q4U2R6 128 aaKnown RBP5.9□□□□□ -1.46
PTPN9-203ENST00000563835 MRPL54Q6P161 138 aaKnown RBP5.9□□□□□ -1.46
PTPN9-203ENST00000563835 SDIM1Q6ZPB5 146 aa5.9□□□□□ -1.46
PTPN9-203ENST00000563835 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms