RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 PRR27Q6MZM9 219 aa6.58□□□□□ -1.36
SF3B3-204ENST00000563739 ENHOQ6UWT2 76 aa6.58□□□□□ -1.36
SF3B3-204ENST00000563739 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
SF3B3-204ENST00000563739 PTH2Q96A98 100 aa6.58□□□□□ -1.36
SF3B3-204ENST00000563739 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
SF3B3-204ENST00000563739 TMSB15BA0A087X1C1 80 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 H3BVH4 76 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 KCNIP4Q6PIL6 250 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 ZFP82Q8N141 532 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 OSTCQ9NRP0 149 aa6.57□□□□□ -1.36
SF3B3-204ENST00000563739 USP17L23D6RBM5 183 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 CIDEAO60543 219 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
SF3B3-204ENST00000563739 RPL19P84098 196 aaKnown RBP6.56□□□□□ -1.36
SF3B3-204ENST00000563739 DNLZQ5SXM8 178 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 BIN3Q9NQY0 253 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
SF3B3-204ENST00000563739 TRAV9-1A0A075B6T8 112 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 GRIFINA4D1Z8 144 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 FAM231DQ6ZW35 169 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 RMI2Q96E14 147 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 V9GYV3 84 aa6.55□□□□□ -1.36
SF3B3-204ENST00000563739 PHOX2AO14813 284 aa6.54□□□□□ -1.36
SF3B3-204ENST00000563739 TRGC2P03986 189 aa6.54□□□□□ -1.36
SF3B3-204ENST00000563739 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
SF3B3-204ENST00000563739 CHTF8P0CG12 524 aa6.54□□□□□ -1.36
SF3B3-204ENST00000563739 ZFP2Q6ZN57 461 aa6.54□□□□□ -1.36
SF3B3-204ENST00000563739 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 P01737 135 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 SLPIP03973 132 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 RNASE7Q9H1E1 156 aaKnown RBP6.53□□□□□ -1.36
SF3B3-204ENST00000563739 PHLDA3Q9Y5J5 127 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
SF3B3-204ENST00000563739 SNAI2O43623 268 aa6.52□□□□□ -1.37
SF3B3-204ENST00000563739 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
SF3B3-204ENST00000563739 S100A6P06703 90 aa6.52□□□□□ -1.37
SF3B3-204ENST00000563739 RPS20P60866 119 aaKnown RBP6.52□□□□□ -1.37
SF3B3-204ENST00000563739 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
SF3B3-204ENST00000563739 MPV17L2Q567V2 206 aa6.52□□□□□ -1.37
SF3B3-204ENST00000563739 NUDT10Q8NFP7 164 aa6.52□□□□□ -1.37
SF3B3-204ENST00000563739 OR2D3Q8NGH3 330 aa6.52□□□□□ -1.37
SF3B3-204ENST00000563739 NUDT11Q96G61 164 aa6.52□□□□□ -1.37
SF3B3-204ENST00000563739 A0A087WYN8 130 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 SMIM27A0A1W2PRY6 76 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 A8MWV9 139 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 M0R381 172 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 OR5AL1P0C617 328 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 TRGC1P0CF51 173 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 IGLC6P0CF74 106 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 GZMBP10144 247 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 C14orf177Q52M58 125 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-204ENST00000563739 OR10AG1Q8NH19 301 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 SPACA4Q8TDM5 124 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-204ENST00000563739 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
SF3B3-204ENST00000563739 KIF25-AS1Q9Y6Z4 181 aa6.51□□□□□ -1.37
SF3B3-204ENST00000563739 XKRY2A2RUG3 117 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 NDUFA6P56556 154 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 UBE2D3P61077 147 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 UBE2D2P62837 147 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 DGAT2L7PQ6IED9 249 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 FER1L6-AS1Q8NA97 138 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
SF3B3-204ENST00000563739 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
SF3B3-204ENST00000563739 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 RHODO00212 210 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 CTRLP40313 264 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 CNBPP62633 177 aaKnown RBP6.49□□□□□ -1.37
SF3B3-204ENST00000563739 FABP9Q0Z7S8 132 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 COX19Q49B96 90 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 CT83Q5H943 113 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 TSKUQ8WUA8 353 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 TPPP3Q9BW30 176 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 PRR34Q9NV39 138 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 TRAPPC1Q9Y5R8 145 aa6.49□□□□□ -1.37
SF3B3-204ENST00000563739 A0A087WWL8 130 aa6.48□□□□□ -1.37
SF3B3-204ENST00000563739 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms