RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	RAB5C	P51148	216 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	MZT2B	Q6NZ67	158 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	ZNF664	Q8N3J9	261 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	PGLYRP4	Q96LB8	373 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	ZNF471	Q9BX82	626 aa	Predicted RBP	5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	PSORS1C2	Q9UIG4	136 aa		5.08	□□□□□ -1.6
CKLF-208	ENST00000563092	GAGE12H	A6NDE8	117 aa		5.07	□□□□□ -1.6
CKLF-208	ENST00000563092	TCEAL7	Q9BRU2	100 aa		5.07	□□□□□ -1.6
CKLF-208	ENST00000563092	MARVELD1	Q9BSK0	173 aa		5.07	□□□□□ -1.6
CKLF-208	ENST00000563092	TMEM243	Q9BU79	118 aa		5.07	□□□□□ -1.6
CKLF-208	ENST00000563092	MLST8	Q9BVC4	326 aa		5.07	□□□□□ -1.6
CKLF-208	ENST00000563092	KRTAP3-1	Q9BYR8	98 aa		5.07	□□□□□ -1.6
CKLF-208	ENST00000563092	FHIT	P49789	147 aa		5.06	□□□□□ -1.6
CKLF-208	ENST00000563092	HIGD2B	Q4VC39	106 aa		5.06	□□□□□ -1.6
CKLF-208	ENST00000563092	CTXND1	A0A1B0GTU2	59 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092		F5H697	171 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	INMT-MINDY4	F8WBC2	141 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	UBE2G2	P60604	165 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	FOXI1	Q12951	378 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	SPANXN1	Q5VSR9	72 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	LINC00299	Q6ZSB3	139 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	PKIG	Q9Y2B9	76 aa		5.05	□□□□□ -1.6
CKLF-208	ENST00000563092	MUC21	A0A140T8X8	626 aa		5.04	□□□□□ -1.6
CKLF-208	ENST00000563092	SULT1A2	P50226	295 aa		5.04	□□□□□ -1.6
CKLF-208	ENST00000563092	UBE2G1	P62253	170 aa		5.04	□□□□□ -1.6
CKLF-208	ENST00000563092	SUMO4	Q6EEV6	95 aa		5.04	□□□□□ -1.6
CKLF-208	ENST00000563092	ENKUR	Q8TC29	256 aa		5.04	□□□□□ -1.6
CKLF-208	ENST00000563092	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.04	□□□□□ -1.6
CKLF-208	ENST00000563092	AP1S3	Q96PC3	154 aa		5.04	□□□□□ -1.6
CKLF-208	ENST00000563092		A0A1W2PNN7	141 aa		5.03	□□□□□ -1.6
CKLF-208	ENST00000563092	NKX2-5	P52952	324 aa	Predicted RBP	5.03	□□□□□ -1.6
CKLF-208	ENST00000563092	PTTG1IP	P53801	180 aa		5.03	□□□□□ -1.6
CKLF-208	ENST00000563092	IFITM3	Q01628	133 aa		5.03	□□□□□ -1.6
CKLF-208	ENST00000563092	PRR26	Q8N8Z3	221 aa		5.03	□□□□□ -1.6
CKLF-208	ENST00000563092	TRAV26-2	A0A0B4J265	109 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	SSNA1	O43805	119 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	UPK1B	O75841	260 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	KRTAP1-4	P0C5Y4	121 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	IGLC6	P0CF74	106 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	SMIM17	P0DL12	118 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	RASL11A	Q6T310	242 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	NIT2	Q9NQR4	276 aa		5.02	□□□□□ -1.61
CKLF-208	ENST00000563092	IGLV1-50	A0A075B6I6	118 aa		5.01	□□□□□ -1.61
CKLF-208	ENST00000563092	S100A9	P06702	114 aa	Known RBP	5.01	□□□□□ -1.61
CKLF-208	ENST00000563092	AKR1C3	P42330	323 aa		5.01	□□□□□ -1.61
CKLF-208	ENST00000563092	AMT	P48728	403 aa		5.01	□□□□□ -1.61
CKLF-208	ENST00000563092	CACNG7	P62955	275 aa		5.01	□□□□□ -1.61
CKLF-208	ENST00000563092	CARD19	Q96LW7	228 aa		5.01	□□□□□ -1.61
CKLF-208	ENST00000563092	IGHV1-58	A0A0C4DH39	117 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092		H7C423	109 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	UBE2L6	O14933	153 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	COTL1	Q14019	142 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	RPL7L1	Q6DKI1	246 aa	Known RBP	5	□□□□□ -1.61
CKLF-208	ENST00000563092	FER1L6-AS1	Q8NA97	138 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	S100Z	Q8WXG8	99 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	DIRC1	Q969H9	104 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	LINC00526	Q96FQ7	95 aa		5	□□□□□ -1.61
CKLF-208	ENST00000563092	LOC107984640	A0A0U1RRK4	108 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	MAP1LC3B2	A6NCE7	125 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092		H0Y9J4	135 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	MT-ND6	P03923	174 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	IGLV7-43	P04211	117 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	MGP	P08493	103 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	NTF3	P20783	257 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	DEFA3	P59666	94 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	SST	P61278	116 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	SYCN	Q0VAF6	134 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	BAGE2	Q86Y30	109 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	OR5A1	Q8NGJ0	315 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	MAP1LC3B	Q9GZQ8	125 aa		4.99	□□□□□ -1.61
CKLF-208	ENST00000563092	IGKV3OR2-268	A0A0C4DH90	116 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	LINC00959	A0A1B0GUT2	108 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	NCR2	O95944	276 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	PRR4	Q16378	134 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	C21orf62-AS1	Q17RA5	79 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092		Q5BKY6	102 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	C9orf116	Q5BN46	136 aa	Predicted RBP	4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	C1orf137	Q5JT78	98 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	CST9LP1	Q5W188	147 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092		Q6ZNX1	250 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	NUP35	Q8NFH5	326 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	STOML3	Q8TAV4	291 aa		4.98	□□□□□ -1.61
CKLF-208	ENST00000563092	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	C19orf71	A6NCJ1	209 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092		F2Z2F3	143 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	CCL25	O15444	150 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	PAGE4	O60829	102 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	FGF6	P10767	208 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	ZNF25	P17030	456 aa	Predicted RBP	4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	XCL1	P47992	114 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	MEF2B	Q02080	365 aa	Predicted RBP	4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	KRTAP11-1	Q8IUC1	163 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	CNFN	Q9BYD5	112 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	NDUFA13	Q9P0J0	144 aa		4.97	□□□□□ -1.61
CKLF-208	ENST00000563092	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	APOM	O95445	188 aa		4.96	□□□□□ -1.62
CKLF-208	ENST00000563092	TRGC1	P0CF51	173 aa		4.96	□□□□□ -1.62

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