RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
MAP1LC3B-203ENST00000562778 KRTAP26-1Q6PEX3 210 aa12.29□□□□□ -0.44
MAP1LC3B-203ENST00000562778 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
MAP1LC3B-203ENST00000562778 TMEM243Q9BU79 118 aa12.29□□□□□ -0.44
MAP1LC3B-203ENST00000562778 EIF5A2Q9GZV4 153 aaKnown RBP12.29□□□□□ -0.44
MAP1LC3B-203ENST00000562778 GFRA4Q9GZZ7 299 aa12.29□□□□□ -0.44
MAP1LC3B-203ENST00000562778 IGLV4-60A0A075B6I1 120 aa12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 IGLV10-54A0A075B6I4 117 aa12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 FAM231DQ6ZW35 169 aa12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 COMMD7Q86VX2 200 aa12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 SLC7A5P1Q8MH63 180 aa12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 C20orf203Q8NBC4 194 aa12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
MAP1LC3B-203ENST00000562778 REG3AQ06141 175 aa12.27□□□□□ -0.45
MAP1LC3B-203ENST00000562778 SCXQ7RTU7 201 aa12.27□□□□□ -0.45
MAP1LC3B-203ENST00000562778 FAM210AQ96ND0 272 aa12.27□□□□□ -0.45
MAP1LC3B-203ENST00000562778 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.45
MAP1LC3B-203ENST00000562778 PRSS1P07477 247 aa12.26□□□□□ -0.45
MAP1LC3B-203ENST00000562778 SRP19P09132 144 aaKnown RBP12.25□□□□□ -0.45
MAP1LC3B-203ENST00000562778 AMTP48728 403 aa12.25□□□□□ -0.45
MAP1LC3B-203ENST00000562778 COTL1Q14019 142 aa12.25□□□□□ -0.45
MAP1LC3B-203ENST00000562778 C14orf177Q52M58 125 aa12.25□□□□□ -0.45
MAP1LC3B-203ENST00000562778 LINC00528Q8N1L1 170 aa12.25□□□□□ -0.45
MAP1LC3B-203ENST00000562778 A8MWL6 223 aa12.24□□□□□ -0.45
MAP1LC3B-203ENST00000562778 ATP6V1G1O75348 118 aa12.24□□□□□ -0.45
MAP1LC3B-203ENST00000562778 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
MAP1LC3B-203ENST00000562778 DMBT1Q9UGM3 2413 aaPredicted RBP12.23□□□□□ -0.45
MAP1LC3B-203ENST00000562778 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
MAP1LC3B-203ENST00000562778 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
MAP1LC3B-203ENST00000562778 UBE2L6O14933 153 aa12.23□□□□□ -0.45
MAP1LC3B-203ENST00000562778 SMIM15Q7Z3B0 74 aa12.23□□□□□ -0.45
MAP1LC3B-203ENST00000562778 GAS8-AS1O95177 125 aa12.22□□□□□ -0.45
MAP1LC3B-203ENST00000562778 CT83Q5H943 113 aa12.22□□□□□ -0.45
MAP1LC3B-203ENST00000562778 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
MAP1LC3B-203ENST00000562778 SDHAF1A6NFY7 115 aa12.2□□□□□ -0.46
MAP1LC3B-203ENST00000562778 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
MAP1LC3B-203ENST00000562778 CIRBP-AS1Q8TBR5 109 aa12.2□□□□□ -0.46
MAP1LC3B-203ENST00000562778 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
MAP1LC3B-203ENST00000562778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
MAP1LC3B-203ENST00000562778 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
MAP1LC3B-203ENST00000562778 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
MAP1LC3B-203ENST00000562778 OSTCQ9NRP0 149 aa12.19□□□□□ -0.46
MAP1LC3B-203ENST00000562778 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
MAP1LC3B-203ENST00000562778 C9JQL5 133 aa12.18□□□□□ -0.46
MAP1LC3B-203ENST00000562778 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
MAP1LC3B-203ENST00000562778 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
MAP1LC3B-203ENST00000562778 A0A1B0GUT8 65 aa12.17□□□□□ -0.46
MAP1LC3B-203ENST00000562778 PLA2G1BP04054 148 aaKnown RBP12.17□□□□□ -0.46
MAP1LC3B-203ENST00000562778 SRSF3P84103 164 aaKnown RBP12.17□□□□□ -0.46
MAP1LC3B-203ENST00000562778 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
MAP1LC3B-203ENST00000562778 RNF185Q96GF1 192 aa12.17□□□□□ -0.46
MAP1LC3B-203ENST00000562778 V9GYV3 84 aa12.17□□□□□ -0.46
MAP1LC3B-203ENST00000562778 APCSP02743 223 aa12.16□□□□□ -0.46
MAP1LC3B-203ENST00000562778 DGAT2L7PQ6IED9 249 aa12.16□□□□□ -0.46
MAP1LC3B-203ENST00000562778 C9orf163Q8N9P6 203 aa12.16□□□□□ -0.46
MAP1LC3B-203ENST00000562778 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 NCR2O95944 276 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 PMCHP20382 165 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 RPS10P46783 165 aaKnown RBP12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 RPL23P62829 140 aaKnown RBP12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 AMMECR1LQ6DCA0 310 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 RNASEKQ6P5S7 137 aaKnown RBP12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
MAP1LC3B-203ENST00000562778 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 PANO1I0J062 215 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 I3L3M4 83 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 FGF6P10767 208 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 RAB4AP20338 218 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 TMEM241Q24JQ0 296 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
MAP1LC3B-203ENST00000562778 PKHD1L1Q86WI1 4243 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 SLPIP03973 132 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 S100A1P23297 94 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 ADIRFQ15847 76 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 CLRN3Q8NCR9 226 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.13□□□□□ -0.47
MAP1LC3B-203ENST00000562778 TSHBP01222 138 aa12.12□□□□□ -0.47
MAP1LC3B-203ENST00000562778 KRTAP10-4P60372 401 aaPredicted RBP12.12□□□□□ -0.47
MAP1LC3B-203ENST00000562778 PEA15Q15121 130 aa12.12□□□□□ -0.47
MAP1LC3B-203ENST00000562778 LRP1Q07954 4544 aaKnown RBP12.11□□□□□ -0.47
MAP1LC3B-203ENST00000562778 FAM74A3Q4VXF1 159 aa12.11□□□□□ -0.47
MAP1LC3B-203ENST00000562778 SDIM1Q6ZPB5 146 aa12.11□□□□□ -0.47
MAP1LC3B-203ENST00000562778 C15orf56Q8N910 161 aa12.11□□□□□ -0.47
MAP1LC3B-203ENST00000562778 H7C423 109 aa12.1□□□□□ -0.47
MAP1LC3B-203ENST00000562778 POLR2KP53803 58 aaKnown RBP12.1□□□□□ -0.47
MAP1LC3B-203ENST00000562778 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
MAP1LC3B-203ENST00000562778 CHCHD10Q8WYQ3 142 aaPredicted RBP12.1□□□□□ -0.47
MAP1LC3B-203ENST00000562778 NAT8Q9UHE5 227 aa12.1□□□□□ -0.47
MAP1LC3B-203ENST00000562778 FAT3Q8TDW7 4589 aa12.09□□□□□ -0.47
MAP1LC3B-203ENST00000562778 ESDP10768 282 aa12.09□□□□□ -0.47
MAP1LC3B-203ENST00000562778 RIGQ13278 110 aa12.09□□□□□ -0.47
MAP1LC3B-203ENST00000562778 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
MAP1LC3B-203ENST00000562778 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms